RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ASH2LQ9UBL3 628 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ST6GALNAC2Q9UJ37 374 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 AMDHD2Q9Y303 409 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 TIMM10BQ9Y5J6 103 aa10.7□□□□□ -0.7
SCARB1-204ENST00000535005 USP9XQ93008 2570 aaPredicted RBP10.7□□□□□ -0.7
SCARB1-204ENST00000535005 ANKRD20A5PA0PJZ0 165 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 PHYHO14832 338 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 NDUFB6O95139 128 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF32P17041 273 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 CCKARP32238 428 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 ARR3P36575 388 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 RPS27P42677 84 aaKnown RBP10.69□□□□□ -0.7
SCARB1-204ENST00000535005 HCCSP53701 268 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 SCAND1P57086 179 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 RELNP78509 3460 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 SORDQ00796 357 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 TFF3Q07654 80 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 FAM169BQ8N8A8 192 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 SMAP2Q8WU79 429 aaPredicted RBP10.69□□□□□ -0.7
SCARB1-204ENST00000535005 THEM6Q8WUY1 208 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 FCAMRQ8WWV6 532 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 ASB17Q8WXJ9 295 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 SMIM19Q96E16 107 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 ABHD6Q9BV23 337 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 C1orf198Q9H425 327 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 LAMP5Q9UJQ1 280 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 GDF2Q9UK05 429 aaPredicted RBP10.69□□□□□ -0.7
SCARB1-204ENST00000535005 COPS3Q9UNS2 423 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 POLR1DQ9Y2S0 133 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 KLHDC2Q9Y2U9 406 aa10.69□□□□□ -0.7
SCARB1-204ENST00000535005 CLEC18AA5D8T8 446 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 NKX2-6A6NCS4 301 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 J3QKU1 62 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 HLA-HP01893 362 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 SNRPBP14678 240 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 VEGFCP49767 419 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 UBE2NP61088 152 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ROM1Q03395 351 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF85Q03923 595 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 SLC3A1Q07837 685 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 EIF2B1Q14232 305 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 CORO6Q6QEF8 472 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 DEGS2Q6QHC5 323 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 CLEC18BQ6UXF7 455 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 UNQ9370/PRO34162Q6UXP9 181 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 Q6ZTK2 550 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 TMUB2Q71RG4 321 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 DCXRQ7Z4W1 244 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 LINC00346Q8IVM7 164 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 CDH26Q8IXH8 852 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 CLEC18CQ8NCF0 446 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 BEST4Q8NFU0 473 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 S100PBPQ96BU1 408 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 C4orf36Q96KX1 117 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 OR2H1Q9GZK4 316 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 NOX3Q9HBY0 568 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ETV7Q9Y603 341 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 SLC25A15Q9Y619 301 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF503-AS2A6NEH8 195 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ARPC1BO15143 372 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 WNT11O96014 354 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 PATE4P0C8F1 98 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 UBBP0CG47 229 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 UBCP0CG48 685 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 CALCBP10092 127 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 RPA2P15927 270 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 HOXC12P31275 282 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 HOXA1P49639 335 aaPredicted RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 RAB1AP62820 205 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 RPS27AP62979 156 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 UBA52P62987 128 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 PSG4Q00888 419 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 EGR3Q06889 387 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF684Q5T5D7 378 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 RPL22L1Q6P5R6 122 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 GSG1LQ6UXU4 331 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 TMEM17Q86X19 198 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 OR10S1Q8NGN2 331 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 OR52N5Q8NH56 324 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 RNF133Q8WVZ7 376 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 GHSRQ92847 366 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF75AQ96N20 296 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 AMELYQ99218 206 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 WNT5BQ9H1J7 359 aa10.68□□□□□ -0.7
SCARB1-204ENST00000535005 PNRC2Q9NPJ4 139 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 MRPS7Q9Y2R9 242 aaKnown RBP10.68□□□□□ -0.7
SCARB1-204ENST00000535005 SPTBN1Q01082 2364 aaKnown RBP10.67□□□□□ -0.7
SCARB1-204ENST00000535005 PYCARD-AS1I3L0S3 204 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 RER1O15258 196 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 SGCEO43556 437 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 ZNF254O75437 659 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 LPLP06858 475 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 H2AFB1P0C5Y9 115 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 COX5BP10606 129 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 CD79AP11912 226 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 CBR1P16152 277 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 CBX5P45973 191 aa10.67□□□□□ -0.7
SCARB1-204ENST00000535005 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.73e-6■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms