RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NPRL2Q8WTW4 380 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 RAB39BQ96DA2 213 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 MMP25Q9NPA2 562 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 MRM2Q9UI43 246 aaKnown RBP16.98■□□□□ 0.31
SMPD1-210ENST00000534405 A0A0A6YYH2 397 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 A6NJ64 397 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 C17orf51A8MQB3 221 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 C17orf105B2RV13 164 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 GFERP55789 205 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 ERVFC1-1P60608 527 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 RASGEF1BQ0VAM2 473 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 IL15RAQ13261 267 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 MRPL52Q86TS9 123 aaKnown RBP16.97■□□□□ 0.31
SMPD1-210ENST00000534405 RLN3Q8WXF3 142 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 RTN4RQ9BZR6 473 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 SRA1Q9HD15 236 aaKnown RBP16.97■□□□□ 0.31
SMPD1-210ENST00000534405 LUZP4Q9P127 313 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 PRUNE2Q8WUY3 3088 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 OR4C45A6NMZ5 311 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 DFFBO76075 338 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 AMBPP02760 352 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 EPHA1P21709 976 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 RPS27P42677 84 aaKnown RBP16.97■□□□□ 0.31
SMPD1-210ENST00000534405 CAPZBP47756 277 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 PMPCAQ10713 525 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 HIKESHIQ53FT3 197 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 ALG10Q5BKT4 473 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 OR10AC1Q8NH08 325 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 PTPMT1Q8WUK0 201 aaPredicted RBP16.97■□□□□ 0.31
SMPD1-210ENST00000534405 KTI12Q96EK9 354 aaPredicted RBP16.97■□□□□ 0.31
SMPD1-210ENST00000534405 DNAJA3Q96EY1 480 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 LPAR4Q99677 370 aa16.97■□□□□ 0.31
SMPD1-210ENST00000534405 NXF5Q9H1B4 397 aaKnown RBP16.97■□□□□ 0.31
SMPD1-210ENST00000534405 NUP210LQ5VU65 1888 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 ASAH2BP0C7U1 165 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 DMRTA1Q5VZB9 504 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 MDGA2Q7Z553 956 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF283Q8N7M2 679 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 POC1AQ8NBT0 407 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 KLHDC7BQ96G42 594 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 ZPBPQ9BS86 351 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 SLC26A1Q9H2B4 701 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 ARV1Q9H2C2 271 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 PLEKHA2Q9HB19 425 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 URGCP-MRPS24S4R325 110 aa16.96■□□□□ 0.31
SMPD1-210ENST00000534405 IGHV5-51A0A0C4DH38 117 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 H3BQ15 152 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 ABHD16AO95870 558 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 OR5AC1P0C628 307 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 SLC16A9Q7RTY1 509 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF440Q8IYI8 595 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 OR51A4Q8NGJ6 313 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 C2orf50Q96LR7 162 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 GPR87Q9BY21 358 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 FBXL17Q9UF56 701 aa16.96■□□□□ 0.3
SMPD1-210ENST00000534405 SEC16AO15027 2179 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 A0A1W2PPC4 97 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 BLACEA4D250 179 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF705GA8MUZ8 300 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 IGLV3-19P01714 112 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 CXCR1P25024 350 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 SLC25A1P53007 311 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 SLC37A1P57057 533 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 RPL18Q07020 188 aaKnown RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 ABLIM2Q6H8Q1 611 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF573Q86YE8 665 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 PRR22Q8IZ63 422 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 LIPHQ8WWY8 451 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 PNO1Q9NRX1 252 aaKnown RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 CBLN4Q9NTU7 201 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 WISP1O95388 367 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 FBXO45P0C2W1 286 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 SEC11BP0C7V7 166 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 PNMTP11086 282 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 CAMLGP49069 296 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 SUCLG1P53597 346 aaKnown RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 GABREP78334 506 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 SLC35A1P78382 337 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 TMEM128Q5BJH2 165 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 ARSJQ5FYB0 599 aaPredicted RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 SVIPQ8NHG7 77 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 ADAD1Q96M93 576 aaKnown RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 TSPAN32Q96QS1 320 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 COMMD4Q9H0A8 199 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 ZMAT3Q9HA38 289 aaKnown RBP16.95■□□□□ 0.3
SMPD1-210ENST00000534405 TCFL5Q9UL49 500 aa16.95■□□□□ 0.3
SMPD1-210ENST00000534405 CACNA1CQ13936 2221 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 TLCD2A6NGC4 264 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 TMEM210A6NLX4 147 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 CDRT15L2A8MXV6 281 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 H3BSH0 61 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 UTS2O95399 124 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 GLIPR1P48060 266 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 BLKP51451 505 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 AFF3P51826 1226 aaKnown RBP16.94■□□□□ 0.3
SMPD1-210ENST00000534405 UBE2KP61086 200 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 OTPQ5XKR4 325 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 SLC35D2Q76EJ3 337 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 DEFB119Q8N690 84 aa16.94■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF676Q8N7Q3 588 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms