RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 MTERF3Q96E29 417 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 TRNT1Q96Q11 434 aaKnown RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 EBF4Q9BQW3 602 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF649Q9BS31 505 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC35A5Q9BS91 424 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 ELOVL1Q9BW60 279 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC19A3Q9BZV2 496 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 NPFFR1Q9GZQ6 430 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 SIAEQ9HAT2 523 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 EDA2RQ9HAV5 297 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PLEKHA2Q9HB19 425 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 S100A14Q9HCY8 104 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 CCNB1IP1Q9NPC3 277 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 NANSQ9NR45 359 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 POLE3Q9NRF9 147 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 MAN2C1Q9NTJ4 1040 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 PPP1R14DQ9NXH3 145 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF443Q9Y2A4 671 aaPredicted RBP2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 RNF213Q63HN8 5207 aa2.35□□□□□ -2.03
CHMP4A-208ENST00000534106 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PKD1P98161 4303 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 A0A1B0GVG6 124 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 A0A1B0GVI7 797 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 A6NDX4 124 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TMEM247A6NEH6 219 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LRRC30A6NM36 301 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 IFITM10A6NMD0 228 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LGALS8O00214 317 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SURF4O15260 269 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ITM2AO43736 263 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 OR2T1O43869 369 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TYROBPO43914 113 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FKBP6O75344 327 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 DEDDO75618 318 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TRMUO75648 421 aaKnown RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LY6G6CO95867 125 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LHBP01229 141 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PTHP01270 115 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 IGF2P01344 180 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 IGKV3-20P01619 116 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 HLA-DQA2P01906 255 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 MBPP02686 304 aaPredicted RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SERPINE1P05121 402 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 CHRNGP07510 517 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 BPGMP07738 259 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 GUSBP08236 651 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FRMD6-AS1P0C7T7 363 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ETFAP13804 333 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 UQCRBP14927 111 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ANOS1P23352 680 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 CPT2P23786 658 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 CD24P25063 80 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 CHATP28329 748 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 VDAC2P45880 294 aaPredicted RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SRP9P49458 86 aaKnown RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 CEBPDP49716 269 aaPredicted RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SERPINB9P50453 376 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 RPS6KA3P51812 740 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 UBE2E1P51965 193 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ARHGDIAP52565 204 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 CDH12P55289 794 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 RAB25P57735 213 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 GMFBP60983 142 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ABCE1P61221 599 aaKnown RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 HPCAP84074 193 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FLOT2Q14254 428 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 OR1Q1Q15612 314 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 HIST3H3Q16695 136 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LRRC75BQ2VPJ9 315 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LIN52Q52LA3 116 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TNFAIP8L3Q5GJ75 292 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LDLRAD2Q5SZI1 272 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 GFI1BQ5VTD9 330 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM91A1Q658Y4 838 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF621Q6ZSS3 439 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ARPINQ7Z6K5 226 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PXKQ7Z7A4 578 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 DHDDSQ86SQ9 333 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ZNF329Q86UD4 541 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 NAA40Q86UY6 237 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SATL1Q86VE3 508 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 IGFN1Q86VF2 1251 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 LCA5Q86VQ0 697 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PTOV1Q86YD1 416 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 ARMC8Q8IUR7 673 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC22A9Q8IVM8 553 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 C10orf107Q8IVU9 208 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 PEX5LQ8IYB4 626 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TRIML2Q8N7C3 387 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FAM216BQ8N7L0 139 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 FNDC5Q8NAU1 212 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 OR8G5Q8NG78 346 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 OR6S1Q8NH40 331 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 MOSPD2Q8NHP6 518 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC38A5Q8WUX1 472 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 TWIST2Q8WVJ9 160 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC38A4Q969I6 547 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 RCN3Q96D15 328 aa2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 SLC25A44Q96H78 314 aaPredicted RBP2.34□□□□□ -2.03
CHMP4A-208ENST00000534106 C7orf26Q96N11 449 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms