RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 POLR3KQ9Y2Y1 108 aaPredicted RBP7.29□□□□□ -1.24
COPB1-210ENST00000533533 RHBDD3Q9Y3P4 386 aa7.29□□□□□ -1.24
COPB1-210ENST00000533533 SNX5Q9Y5X3 404 aa7.29□□□□□ -1.24
COPB1-210ENST00000533533 AUP1Q9Y679 476 aa7.29□□□□□ -1.24
COPB1-210ENST00000533533 CMYA5Q8N3K9 4069 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 A0A0U1RQV5 110 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 A0A1B0GVI7 797 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 TRAPPC2LH3BP13 241 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 CLDN34H7C241 214 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 GPR37O15354 613 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 MTRF1O75570 445 aaKnown RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 SULT1C4O75897 302 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 IGHV2-70P01814 119 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 TTRP02766 147 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 RNASE1P07998 156 aaKnown RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 ACKR3P25106 362 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 CD200P41217 278 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 MMP16P51512 607 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 OR12D2P58182 307 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 ADARB1P78563 741 aaKnown RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 RIPPLY1Q0D2K3 151 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 PRDX4Q13162 271 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 MAB21L1Q13394 359 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 MPPED2Q15777 294 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 KLHL22Q53GT1 634 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 MOB3CQ70IA8 216 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 C1orf87Q8N0U7 546 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 SPICQ8N5J4 248 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 SPERTQ8NA61 448 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 OR52I1Q8NGK6 324 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 NRG4Q8WWG1 115 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 SLC25A28Q96A46 364 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 C4orf36Q96KX1 117 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 ZNF48Q96MX3 618 aaPredicted RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 MYCBPQ99417 103 aaPredicted RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 MICU1Q9BPX6 476 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 ALG8Q9BVK2 526 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 SLITRK2Q9H156 845 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 VCX3BQ9H321 246 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 FN3KRPQ9HA64 309 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 PLEKHA1Q9HB21 404 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 C1orf123Q9NWV4 160 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 NUFIP1Q9UHK0 495 aaKnown RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 PIGLQ9Y2B2 252 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 EXOGQ9Y2C4 368 aaKnown RBP7.28□□□□□ -1.24
COPB1-210ENST00000533533 MYRFQ9Y2G1 1151 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 INSIG2Q9Y5U4 225 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 NPTNQ9Y639 398 aa7.28□□□□□ -1.24
COPB1-210ENST00000533533 ZNF816-ZNF321PA0A0X1KG74 233 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 A6NIN4 97 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 H0YAE9 185 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 TMEM178BH3BS89 294 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 IFNL4K9M1U5 179 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 SYT7O43581 403 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 FAM20BO75063 409 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 SRSF10O75494 262 aaKnown RBP7.27□□□□□ -1.25
COPB1-210ENST00000533533 WBP4O75554 376 aaKnown RBP7.27□□□□□ -1.25
COPB1-210ENST00000533533 HTR1AP08908 422 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 GNAO1P09471 354 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 FAHP16930 419 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 ZNF12P17014 697 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 AQP4P55087 323 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 GMFBP60983 142 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 SEC61A1P61619 476 aaKnown RBP7.27□□□□□ -1.25
COPB1-210ENST00000533533 BTG1P62324 171 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 ACTA2P62736 377 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 ACTG2P63267 376 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 RAB40BQ12829 278 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 IL18R1Q13478 541 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 SLC9A3R2Q15599 337 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 OR8B8Q15620 311 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 TMEM155Q4W5P6 130 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 MIDNQ504T8 468 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 DMRTC1Q5HYR2 192 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 CEP78Q5JTW2 689 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 FAM201AQ5SY85 155 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 PLCXD3Q63HM9 321 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 ZNF826PQ6ZT77 177 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 LRRC28Q86X40 367 aaPredicted RBP7.27□□□□□ -1.25
COPB1-210ENST00000533533 CATSPERDQ86XM0 798 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 KLBQ86Z14 1044 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 ZDHHC23Q8IYP9 409 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 ELMOD2Q8IZ81 293 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 KLHL36Q8N4N3 616 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 CELF2-AS1Q8N7Q2 184 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 C19orf18Q8NEA5 215 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 BPIFB6Q8NFQ5 453 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 RORBQ92753 470 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 RNF170Q96K19 258 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 MRI1Q9BV20 369 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 RTL8AQ9BWD3 113 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 PATZ1Q9HBE1 687 aaKnown RBP7.27□□□□□ -1.25
COPB1-210ENST00000533533 CHCHD3Q9NX63 227 aaKnown RBP7.27□□□□□ -1.25
COPB1-210ENST00000533533 ENPP5Q9UJA9 477 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 MPC1Q9Y5U8 109 aa7.27□□□□□ -1.25
COPB1-210ENST00000533533 IRGMA1A4Y4 181 aa7.26□□□□□ -1.25
COPB1-210ENST00000533533 A8MXK9 166 aa7.26□□□□□ -1.25
COPB1-210ENST00000533533 J3QRE1 110 aa7.26□□□□□ -1.25
COPB1-210ENST00000533533 DHRS3O75911 302 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms