RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 PLK5Q496M5 336 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 SLC25A53Q5H9E4 307 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 C9orf50Q5SZB4 431 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 OTUD3Q5T2D3 398 aaPredicted RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 OLFML2AQ68BL7 652 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 FAHD1Q6P587 224 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 TEX38Q6PEX7 206 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 WDR82Q6UXN9 313 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 COX15Q7KZN9 410 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 FA2HQ7L5A8 372 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 DET1Q7L5Y6 550 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 SLC16A9Q7RTY1 509 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 S100A7AQ86SG5 101 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 DOLPP1Q86YN1 238 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 DND1Q8IYX4 353 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 KLHDC1Q8N7A1 406 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ZNF614Q8N883 585 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 C11orf44Q8N8P7 122 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 LRRC75AQ8NAA5 344 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 PLPP5Q8NEB5 264 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 LFNGQ8NES3 379 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 OR51S1Q8NGJ8 323 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 OR52E5Q8NH55 327 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 OR51Q1Q8NH59 317 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CNIH3Q8TBE1 160 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 TMEM45BQ96B21 275 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 EID2BQ96D98 161 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 RNF125Q96EQ8 232 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 WDYHV1Q96HA8 205 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 FIZ1Q96SL8 496 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 PIMREGQ9BSJ6 248 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ALG12Q9BV10 488 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 SLC25A51Q9H1U9 297 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CDCP1Q9H5V8 836 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 MED20Q9H944 212 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 HHATLQ9HCP6 504 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ACP6Q9NPH0 428 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CBLN4Q9NTU7 201 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 DLL3Q9NYJ7 618 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ABI3Q9P2A4 366 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 LPAR3Q9UBY5 353 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 CLN8Q9UBY8 286 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 UQCR10Q9UDW1 63 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 ERRFI1Q9UJM3 462 aaPredicted RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 TNFSF18Q9UNG2 199 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 MRPS28Q9Y2Q9 187 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 LSM2Q9Y333 95 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 PDCD11Q14690 1871 aaKnown RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 BCORQ6W2J9 1755 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 TJP1Q07157 1748 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 TET3O43151 1660 aa4.83□□□□□ -1.64
CD44-236ENST00000533222 AHDC1Q5TGY3 1603 aaPredicted RBP4.83□□□□□ -1.64
CD44-236ENST00000533222 FRMPD3Q5JV73 1810 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 TRBV6-7A0A0A0MS04 114 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 C17orf105B2RV13 164 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 F5H5P2 479 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 H0YIZ8 118 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 SULT2B1O00204 365 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 OR2C1O95371 312 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 SLC16A8O95907 504 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 CST1P01037 141 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 CXCL10P02778 98 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 CSN2P05814 226 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 SLC35G6P0C7Q6 338 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 PET100P0DJ07 73 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 LAMP1P11279 417 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 PSG1P11464 419 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 BCKDHAP12694 445 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 PGAM2P15259 253 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 AMD1P17707 334 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 GPX3P22352 226 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 FCARP24071 287 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 PTGER1P34995 402 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 RPL3P39023 403 aaKnown RBP4.82□□□□□ -1.64
CD44-236ENST00000533222 GPR6P46095 362 aaPredicted RBP4.82□□□□□ -1.64
CD44-236ENST00000533222 RPS10P46783 165 aaKnown RBP4.82□□□□□ -1.64
CD44-236ENST00000533222 GABRA2P47869 451 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 NPBWR2P48146 333 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 MARCKSL1P49006 195 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 GNG4P50150 75 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 TCTAP57738 103 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 OR12D2P58182 307 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 TAS2R43P59537 309 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 UBE2NP61088 152 aaKnown RBP4.82□□□□□ -1.64
CD44-236ENST00000533222 IL10RBQ08334 325 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 ZNF763Q0D2J5 394 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 LY6DQ14210 128 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 CLINT1Q14677 625 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 EFNB3Q15768 340 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 SSX1Q16384 188 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 ACOT6Q3I5F7 207 aaPredicted RBP4.82□□□□□ -1.64
CD44-236ENST00000533222 TTLL9Q3SXZ7 439 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 TRMT12Q53H54 448 aaKnown RBP4.82□□□□□ -1.64
CD44-236ENST00000533222 TMEM128Q5BJH2 165 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 ALG10Q5BKT4 473 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 SLC25A30Q5SVS4 291 aa4.82□□□□□ -1.64
CD44-236ENST00000533222 OR2T2Q6IF00 324 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms