RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 LDLRAD3Q86YD5 345 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 HS3ST5Q8IZT8 346 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 OR10Z1Q8NGY1 313 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 LRTOMTQ8WZ04 291 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 RAB3IPQ96QF0 476 aaPredicted RBP14.65□□□□□ -0.06
PCF11-206ENST00000533018 C1orf21Q9H246 121 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 NIPAL2Q9H841 368 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 SLC25A10Q9UBX3 287 aaPredicted RBP14.65□□□□□ -0.06
PCF11-206ENST00000533018 KLHDC2Q9Y2U9 406 aa14.65□□□□□ -0.06
PCF11-206ENST00000533018 AQP12BA6NM10 295 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 PSMD9O00233 223 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 PAHP00439 452 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 AMY2BP19961 511 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 GLRA1P23415 457 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 MAP2K3P46734 347 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 CDK5Q00535 292 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 MIDNQ504T8 468 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 CEP78Q5JTW2 689 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 SLC35D3Q5M8T2 416 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 ATPAF1Q5TC12 328 aaPredicted RBP14.64□□□□□ -0.07
PCF11-206ENST00000533018 TMEM236Q5W0B7 351 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 THAP5Q7Z6K1 395 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 SPATA24Q86W54 205 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 AQP12AQ8IXF9 295 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 PAPD5Q8NDF8 572 aaKnown RBP14.64□□□□□ -0.07
PCF11-206ENST00000533018 LINC01006Q8NI28 216 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 NPRL2Q8WTW4 380 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 CITED1Q99966 193 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 DNTTIP1Q9H147 329 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 NLKQ9UBE8 527 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 NOTCH1P46531 2555 aa14.64□□□□□ -0.07
PCF11-206ENST00000533018 ZNF816-ZNF321PA0A0X1KG74 233 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 TMEM269A0A1B0GVZ9 245 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 OR2AT4A6NND4 320 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 ZNF732B4DXR9 585 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 RNASEK-C17orf49H0YIS7 233 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 M0QZ24 198 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 NPFFO15130 113 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 MRPL3P09001 348 aaKnown RBP14.63□□□□□ -0.07
PCF11-206ENST00000533018 ANXA8P13928 327 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 KLRD1Q13241 179 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 APOFQ13790 326 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 SNAPC1Q16533 368 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 DGUOKQ16854 277 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 FAM76BQ5HYJ3 339 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 KCTD18Q6PI47 426 aaPredicted RBP14.63□□□□□ -0.07
PCF11-206ENST00000533018 METAP1DQ6UB28 335 aaPredicted RBP14.63□□□□□ -0.07
PCF11-206ENST00000533018 ZNF788Q6ZQV5 615 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 HPSE2Q8WWQ2 592 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 DMRTB1Q96MA1 342 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 GAFA1Q96PS6 74 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 MROQ9BYG7 248 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 YY1AP1Q9H869 796 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 TVP23BQ9NYZ1 205 aa14.63□□□□□ -0.07
PCF11-206ENST00000533018 MEIOCA2RUB1 952 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 TIMM23O14925 209 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 GSC2O15499 205 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 RHBDL1O75783 438 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 HOXB6P17509 224 aaKnown RBP14.62□□□□□ -0.07
PCF11-206ENST00000533018 ALOX5APP20292 161 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 CBX1P83916 185 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 BLMHQ13867 455 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 DMRTC1Q5HYR2 192 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 DHRS7BQ6IAN0 325 aaPredicted RBP14.62□□□□□ -0.07
PCF11-206ENST00000533018 MOB3CQ70IA8 216 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 Q8N7P7 452 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 ANGPTL6Q8NI99 470 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 UBE2FQ969M7 185 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 TTTY10Q9BZA0 68 aa14.62□□□□□ -0.07
PCF11-206ENST00000533018 FGF23Q9GZV9 251 aaPredicted RBP14.62□□□□□ -0.07
PCF11-206ENST00000533018 SIGLEC5O15389 551 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 GYG2O15488 501 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 ACAA1P09110 424 aaPredicted RBP14.61□□□□□ -0.07
PCF11-206ENST00000533018 CAPZA1P52907 286 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 KRTAP10-3P60369 221 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 GNG3P63215 75 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 FLOT2Q14254 428 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 TAF9Q16594 264 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 CEACAM21Q3KPI0 293 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 PNKDQ8N490 385 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 ZNRF1Q8ND25 227 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 TMEM185AQ8NFB2 350 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 C8orf46Q8TAG6 207 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 ZNF671Q8TAW3 534 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 DUS3LQ96G46 650 aaKnown RBP14.61□□□□□ -0.07
PCF11-206ENST00000533018 TEAD3Q99594 435 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 YIPF3Q9GZM5 350 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 ELL3Q9HB65 397 aaPredicted RBP14.61□□□□□ -0.07
PCF11-206ENST00000533018 TCF7L1Q9HCS4 588 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 ZNRD1Q9P1U0 126 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 IKZF2Q9UKS7 526 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 GTF2A1LQ9UNN4 478 aa14.61□□□□□ -0.07
PCF11-206ENST00000533018 ANKRD61A6NGH8 418 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 H0YAE9 185 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 FKBP6O75344 327 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 SLC2A5P22732 501 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 DCTDP32321 178 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 SAA4P35542 130 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 CAV3P56539 151 aa14.6□□□□□ -0.07
PCF11-206ENST00000533018 RIPPLY1Q0D2K3 151 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms