RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MSI2Q96DH6 328 aaKnown RBP13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 MALSU1Q96EH3 234 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 KCNK15Q9H427 330 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 RPS10-NUDT3A0A1W2PQS6 291 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 NGFRP08138 427 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 RPS4Y1P22090 263 aaKnown RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 RPS10P46783 165 aaKnown RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 PPP1R1AQ13522 171 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 HNF4GQ14541 408 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 ASB5Q8WWX0 329 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 SCGB2A1O75556 95 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 LSM6P62312 80 aaKnown RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 MPPED2Q15777 294 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 USF2Q15853 346 aaPredicted RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 M1APQ8TC57 530 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 DOCK4Q8N1I0 1966 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 ANKRD36A6QL64 1941 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 TMEM265A0A087WTH1 108 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 C17orf112F2Z3M2 114 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 OR3A4PP47883 348 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 NANOS3P60323 173 aaKnown RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 CLPPQ16740 277 aaPredicted RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 FHL5Q5TD97 284 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 RAB33BQ9H082 229 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 TRGV5A0A0B4J1U4 118 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 LGALS8O00214 317 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF354AO60765 605 aaPredicted RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 IL2RAP01589 272 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 CD1AP06126 327 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 BAXQ07812 192 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 NAA40Q86UY6 237 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 SLC26A10Q8NG04 563 aa13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
PCDHA3-202ENST00000532566 MMP16P51512 607 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 TOR2AQ5JU69 321 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 EXTL1Q92935 676 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 GPX7Q96SL4 187 aaPredicted RBP13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 FAM234AQ9H0X4 552 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 SMOC1Q9H4F8 434 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 AQP7P3A6NL99 342 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 LANCL1O43813 399 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 CDC14BO60729 498 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 CPN1P15169 458 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 KITLGP21583 273 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 FAM185AQ8N0U4 392 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 RNF133Q8WVZ7 376 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 SUCNR1Q9BXA5 334 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 TERTO14746 1132 aaKnown RBP13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 CRYAAP02489 173 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 OR8B8Q15620 311 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 PABPC1L2AQ5JQF8 200 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 RFLNBQ8N5W9 214 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 OR11G2Q8NGC1 345 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 SFT2D1Q8WV19 159 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 NIPSNAP3BQ9BS92 247 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 PROCRQ9UNN8 238 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 KPTNQ9Y664 436 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 TRPM7Q96QT4 1865 aa13.6□□□□□ -0.23
PCDHA3-202ENST00000532566 HLA-DOBP13765 273 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 RPS23P62266 143 aaKnown RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 Q6ZRG5 221 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 OR6S1Q8NH40 331 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 SVILO95425 2214 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 A8MXE2 369 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 CD80P33681 288 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 KLF9Q13886 244 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 OR8G2PQ6IF36 304 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 CDX2Q99626 313 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 SMCO4Q9NRQ5 59 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 PCDHB10Q9UN67 800 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 PCDHGA9Q9Y5G4 932 aaKnown RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 A0A0U1RQK1 487 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 ADRB1P08588 477 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 CXCL3P19876 107 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 GPM6AP51674 278 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 RAB4BP61018 213 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 RNPS1Q15287 305 aaKnown RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 AANATQ16613 207 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 JMJD6Q6NYC1 403 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 NHLRC1Q6VVB1 395 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 GVQW1Q8N7I0 195 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 FRZBQ92765 325 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 FBXW5Q969U6 566 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 TCFL5Q9UL49 500 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 TSPAN2O60636 221 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 TXNDC12O95881 172 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 GLRA1P23415 457 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF718Q3SXZ3 478 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 B3GNTL1Q67FW5 361 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 Q7L0L9 218 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 OR2M3Q8NG83 312 aa13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 GNPNAT1Q96EK6 184 aaPredicted RBP13.59□□□□□ -0.23
PCDHA3-202ENST00000532566 HIPK2Q9H2X6 1198 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms