RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CCDC58Q4VC31 144 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 TMEM155Q4W5P6 130 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 Q71RC1 249 aaPredicted RBP17.49■□□□□ 0.39
CCS-207ENST00000531990 WDR86Q86TI4 376 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 LRRC28Q86X40 367 aaPredicted RBP17.49■□□□□ 0.39
CCS-207ENST00000531990 OR5AK2Q8NH90 309 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 HPSE2Q8WWQ2 592 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 ZNF665Q9H7R5 613 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 TRIM36Q9NQ86 728 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 GPR173Q9NS66 373 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 FKBP14Q9NWM8 211 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 BABAM2Q9NXR7 383 aa17.49■□□□□ 0.39
CCS-207ENST00000531990 ZNF732B4DXR9 585 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 GATBO75879 557 aaKnown RBP17.48■□□□□ 0.39
CCS-207ENST00000531990 ZNF20P17024 532 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 C21orf33P30042 268 aaPredicted RBP17.48■□□□□ 0.39
CCS-207ENST00000531990 RBMXP38159 391 aaKnown RBP17.48■□□□□ 0.39
CCS-207ENST00000531990 KRTAP1-1Q07627 177 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 TMEM42Q69YG0 159 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 ZNF826PQ6ZT77 177 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 BOLLQ8N9W6 283 aaKnown RBP17.48■□□□□ 0.39
CCS-207ENST00000531990 LINC01356Q8N9X3 169 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 GATAD2BQ8WXI9 593 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 TECTBQ96PL2 329 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 TLNRD1Q9H1K6 362 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 SLC7A11Q9UPY5 501 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 ERGIC3Q9Y282 383 aa17.48■□□□□ 0.39
CCS-207ENST00000531990 CDIPTO14735 213 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 ZNF205O95201 554 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 FSTL3O95633 263 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 IGHV2-5P01817 119 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 CDK1P06493 297 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 ZNF16P17020 682 aaPredicted RBP17.47■□□□□ 0.39
CCS-207ENST00000531990 GTF2A1P52655 376 aaPredicted RBP17.47■□□□□ 0.39
CCS-207ENST00000531990 LMO4P61968 165 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 KCNJ8Q15842 424 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 FAM76BQ5HYJ3 339 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 SCCPDHQ8NBX0 429 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 OR13C3Q8NGS6 347 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 LRRC29Q8WV35 223 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 PP6455Q8WZ26 134 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 RPL3LQ92901 407 aaKnown RBP17.47■□□□□ 0.39
CCS-207ENST00000531990 MSI2Q96DH6 328 aaKnown RBP17.47■□□□□ 0.39
CCS-207ENST00000531990 YAE1D1Q9NRH1 226 aa17.47■□□□□ 0.39
CCS-207ENST00000531990 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.46■□□□□ 0.399e-8■■■□□ 15.5
CCS-207ENST00000531990 B4DSR2 109 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 ZFPL1O95159 310 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 TGFAP01135 160 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 CDK5R1Q15078 307 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 DMRTC1Q5HYR2 192 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 FAM201AQ5SY85 155 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 FAM166AQ6J272 317 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 WDR82Q6UXN9 313 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 C11orf53Q8IXP5 236 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 FGGYQ96C11 551 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 C1orf159Q96HA4 380 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 PDCD1LG2Q9BQ51 273 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 CHST5Q9GZS9 411 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 FGF23Q9GZV9 251 aaPredicted RBP17.46■□□□□ 0.39
CCS-207ENST00000531990 TMEM165Q9HC07 324 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 ERVK-18Q9QC07 812 aa17.46■□□□□ 0.39
CCS-207ENST00000531990 ZNF469Q96JG9 3925 aaPredicted RBP17.45■□□□□ 0.38
CCS-207ENST00000531990 HIVEP2P31629 2446 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 ABCA2Q9BZC7 2435 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 LGALS8O00214 317 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 LMX1BO60663 402 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 WNT4P56705 351 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 TAS2R43P59537 309 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 CNN3Q15417 329 aaKnown RBP17.45■□□□□ 0.38
CCS-207ENST00000531990 ZNF573Q86YE8 665 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 GCSAMQ8N6F7 178 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 DEFB108BQ8NET1 73 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 OR10Z1Q8NGY1 313 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 OR10AC1Q8NH08 325 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 TSEN15Q8WW01 171 aaKnown RBP17.45■□□□□ 0.38
CCS-207ENST00000531990 RASSF4Q9H2L5 321 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 OR51I2Q9H344 312 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 BLOC1S6Q9UL45 172 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 PCDHGB5Q9Y5G0 923 aa17.45■□□□□ 0.38
CCS-207ENST00000531990 TRAV38-1A0A0B4J264 116 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 A8MV72 311 aaPredicted RBP17.44■□□□□ 0.38
CCS-207ENST00000531990 OGG1O15527 345 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 LHBP01229 141 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 OCM2P0CE71 109 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 OCMP0CE72 109 aaPredicted RBP17.44■□□□□ 0.38
CCS-207ENST00000531990 CPT2P23786 658 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 CD80P33681 288 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 SLC35A2P78381 396 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 ZNF404Q494X3 552 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 RBM48Q5RL73 367 aaKnown RBP17.44■□□□□ 0.38
CCS-207ENST00000531990 RNLSQ5VYX0 342 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 SFRP4Q6FHJ7 346 aaPredicted RBP17.44■□□□□ 0.38
CCS-207ENST00000531990 XAF1Q6GPH4 301 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 NANOGP1Q8N7R0 232 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 OR51A4Q8NGJ6 313 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 OR51F2Q8NH61 342 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 ZNF671Q8TAW3 534 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 SMIM19Q96E16 107 aa17.44■□□□□ 0.38
CCS-207ENST00000531990 ADAT3Q96EY9 351 aaPredicted RBP17.44■□□□□ 0.38
CCS-207ENST00000531990 TMEM246Q9BRR3 403 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms