RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 H7C1C5 153 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 ST8SIA5O15466 376 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 TSPAN12O95859 305 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 GRPP07492 148 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 DAPP51397 102 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 SSBP1Q04837 148 aaKnown RBP6.55□□□□□ -1.36
CTNND1-229ENST00000531014 C19orf54Q5BKX5 351 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 TMEM81Q6P7N7 255 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 GJC3Q8NFK1 279 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 OR1L6Q8NGR2 347 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 FBXO27Q8NI29 283 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 EDARADDQ8WWZ3 215 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 FGF11Q92914 225 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 RTP4Q96DX8 246 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 KIF13BQ9NQT8 1826 aa6.55□□□□□ -1.36
CTNND1-229ENST00000531014 NAV1Q8NEY1 1877 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ACOT8O14734 319 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 PPM1DO15297 605 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 COCHO43405 550 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 SOD1P00441 154 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 PTGFRP43088 359 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TIAL1Q01085 375 aaKnown RBP eCLIP6.54□□□□□ -1.365e-7■■■■■ 26.8
CTNND1-229ENST00000531014 TMEM176BQ3YBM2 270 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 FAHD2BQ6P2I3 314 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 LIPIQ6XZB0 460 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ISCA2Q86U28 154 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 APCDD1Q8J025 514 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 GALMQ96C23 342 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 GRAMD2BQ96HH9 432 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TNFRSF13CQ96RJ3 184 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TMEM70Q9BUB7 260 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TINAGL1Q9GZM7 467 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 LPAR3Q9UBY5 353 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 SLC23A1Q9UHI7 598 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 CORINQ9Y5Q5 1042 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 NPTNQ9Y639 398 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 A0A1B0GV90 55 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 A0A1W2PPC4 97 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 C7orf72A4D263 438 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ZNF840PA6NDX5 716 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 SMPD2O60906 423 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 CST7O76096 145 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 AGFG2O95081 481 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 WNT11O96014 354 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 OPN1LWP04000 364 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ABOP16442 354 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ASCL1P50553 236 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 PGGT1BP53609 377 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 C21orf58P58505 322 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 C1orf61Q13536 156 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 OR5AS1Q8N127 324 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 HIST1H4GQ99525 98 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 CLEC5AQ9NY25 188 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 IL19Q9UHD0 177 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 FUT9Q9Y231 359 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 FAM74A7A6NL05 159 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TMPRSS11DO60235 418 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MOSPD3O75425 235 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 T-ENOLP0DO92 83 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ARSAP15289 507 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 SNRPGP62308 76 aaKnown RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 GAMTQ14353 236 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TBC1D28Q2M2D7 210 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 HNRNPA1L2Q32P51 320 aaKnown RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 AWAT1Q58HT5 328 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ZNF628Q5EBL2 1059 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 NUFIP2Q7Z417 695 aaKnown RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 LINC00346Q8IVM7 164 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MISPQ8IVT2 679 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MDGA1Q8NFP4 955 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MARCH1Q8TCQ1 289 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ZNF583Q96ND8 569 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 P2RY12Q9H244 342 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 DLEC1Q9Y238 1755 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 A0A1W2PP55 124 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TMEM129A0AVI4 362 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 IGSF23A1L1A6 192 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MS4A18H0YCH9 400 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 SDCBPO00560 298 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 GEMIN2O14893 280 aaKnown RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 EIF1BO60739 113 aaKnown RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ZFAND5O76080 213 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 THBS4P35443 961 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 RGRP47804 291 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 RING1Q06587 406 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 FZD2Q14332 565 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MS4A18Q3C1V0 323 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 PLA1AQ53H76 456 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TGIF2LYQ8IUE0 185 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 STPG2Q8N412 459 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 OR8B3Q8NGG8 313 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 NPY6RQ99463 290 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 ANAPC13Q9BS18 74 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TRAF4Q9BUZ4 470 aaPredicted RBP6.54□□□□□ -1.36
CTNND1-229ENST00000531014 CHRNA10Q9GZZ6 450 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 TREX1Q9NSU2 369 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 CACNG4Q9UBN1 327 aa6.54□□□□□ -1.36
CTNND1-229ENST00000531014 MEIKINA0A087WXM9 373 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms