RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 KRT34O76011 436 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 SPARCP09486 303 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 RHCEP18577 417 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 GLRA1P23415 457 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 COX7A1P24310 79 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 PAX6P26367 422 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 HSD11B1P28845 292 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 PYCR1P32322 319 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 RPS27P42677 84 aaKnown RBP7.27□□□□□ -1.25
VPS11-203ENST00000529545 VDAC2P45880 294 aaPredicted RBP7.27□□□□□ -1.25
VPS11-203ENST00000529545 SMIM11AP58511 58 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 GRB2P62993 217 aaKnown RBP7.27□□□□□ -1.25
VPS11-203ENST00000529545 GABPB1Q06547 395 aaPredicted RBP7.27□□□□□ -1.25
VPS11-203ENST00000529545 KLF10Q13118 480 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 PLA1AQ53H76 456 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 Q6ZS46 218 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 MKXQ8IYA7 352 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 OR5AU1Q8NGC0 362 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 OR2T4Q8NH00 348 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 ANGPTL6Q8NI99 470 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 PIFOQ8TCI5 191 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 RPL3LQ92901 407 aaKnown RBP7.27□□□□□ -1.25
VPS11-203ENST00000529545 FAM162AQ96A26 154 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 FOXRED1Q96CU9 486 aaPredicted RBP7.27□□□□□ -1.25
VPS11-203ENST00000529545 SLAMF6Q96DU3 332 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 AJUBAQ96IF1 538 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 HIST1H2AAQ96QV6 131 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 B9D2Q9BPU9 175 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 TLNRD1Q9H1K6 362 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 NLKQ9UBE8 527 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 TCF19Q9Y242 345 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 RHBDD3Q9Y3P4 386 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 MPC1Q9Y5U8 109 aa7.27□□□□□ -1.25
VPS11-203ENST00000529545 WI2-2373I1.2A0A1W2PRP0 233 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 FMO3P31513 532 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 IFNGR2P38484 337 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 CX3CR1P49238 355 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 ERVFRD-1P60508 538 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 MXRA7P84157 204 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 CD83Q01151 205 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 LIPEQ05469 1076 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.26□□□□□ -1.25
VPS11-203ENST00000529545 SEC23BQ15437 767 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 GFOD2Q3B7J2 385 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 KLHL22Q53GT1 634 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 CENPVQ7Z7K6 275 aaPredicted RBP7.26□□□□□ -1.25
VPS11-203ENST00000529545 TIGD4Q8IY51 512 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 FAM86B1Q8N7N1 296 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 ZNRF1Q8ND25 227 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 OR52H1Q8NGJ2 320 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 OR52J3Q8NH60 311 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 OR5K1Q8NHB7 308 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 WIPF2Q8TF74 440 aaPredicted RBP7.26□□□□□ -1.25
VPS11-203ENST00000529545 SGK3Q96BR1 496 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 WNT10AQ9GZT5 417 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 OR10A2Q9H208 303 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 ELL3Q9HB65 397 aaPredicted RBP7.26□□□□□ -1.25
VPS11-203ENST00000529545 LRP12Q9Y561 859 aa7.26□□□□□ -1.25
VPS11-203ENST00000529545 hCG_38984A0A1B0GV85 526 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 A6NDX4 124 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 ZNF850A8MQ14 1090 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 ZNF593O00488 134 aaPredicted RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 EDF1O60869 148 aaKnown RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 TFF1P04155 84 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 NHLRC4P0CG21 123 aaPredicted RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 ANOS1P23352 680 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 ENTPD1P49961 510 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 RAB13P51153 203 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 SLC25A1P53007 311 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 RPL31P62899 125 aaKnown RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 CBX1P83916 185 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 CCDC121Q6ZUS5 278 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 FAM57BQ71RH2 274 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 PIGWQ7Z7B1 504 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 TMEM219Q86XT9 240 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 OR52L1Q8NGH7 329 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 OR51L1Q8NGJ5 315 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 ZNF671Q8TAW3 534 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 OR5P3Q8WZ94 311 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 MALSU1Q96EH3 234 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 RNF170Q96K19 258 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 ATP6V1G3Q96LB4 118 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 RGCCQ9H4X1 137 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 CMTM6Q9NX76 183 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 USE1Q9NZ43 259 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 NDUFAF4Q9P032 175 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 ZMAT5Q9UDW3 170 aaKnown RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 CD300AQ9UGN4 299 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 TBL2Q9Y4P3 447 aaKnown RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 TSSC4Q9Y5U2 329 aaPredicted RBP7.25□□□□□ -1.25
VPS11-203ENST00000529545 COMMD3-BMI1R4GMX3 469 aa7.25□□□□□ -1.25
VPS11-203ENST00000529545 DNAH9Q9NYC9 4486 aa7.24□□□□□ -1.25
VPS11-203ENST00000529545 IGKV1D-17A0A075B6S4 117 aa7.24□□□□□ -1.25
VPS11-203ENST00000529545 FAM90A8PA6NJQ4 464 aa7.24□□□□□ -1.25
VPS11-203ENST00000529545 SLC1A7O00341 560 aa7.24□□□□□ -1.25
VPS11-203ENST00000529545 NDUFAB1O14561 156 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms