RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 KCTD18Q6PI47 426 aaPredicted RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 WDR82Q6UXN9 313 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 PNLDC1Q8NA58 520 aaKnown RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 OR10Z1Q8NGY1 313 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 OR5K1Q8NHB7 308 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 TECTBQ96PL2 329 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 MICU1Q9BPX6 476 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 CADM1Q9BY67 442 aaKnown RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 PRRG3Q9BZD7 231 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 PAPOLBQ9NRJ5 636 aaKnown RBP8.67□□□□□ -1.02
CPSF1-203ENST00000527916 TVP23BQ9NYZ1 205 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 DNAJC27Q9NZQ0 273 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 LAMP5Q9UJQ1 280 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 RHBDD3Q9Y3P4 386 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 TMEM14AQ9Y6G1 99 aa8.67□□□□□ -1.02
CPSF1-203ENST00000527916 A0A0U1RQV5 110 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF816-ZNF321PA0A0X1KG74 233 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 hCG_1807616A0A1W2PRN6 198 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 DVL1O14640 695 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 ATP5HO75947 161 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 TSPAN9O75954 239 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 GYPAP02724 150 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 SFTPBP07988 381 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 MMP9P14780 707 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 ATP6V1B1P15313 513 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 TGFBR2P37173 567 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 RPS7P62081 194 aaKnown RBP8.66□□□□□ -1.02
CPSF1-203ENST00000527916 HOXA4Q00056 320 aaPredicted RBP8.66□□□□□ -1.02
CPSF1-203ENST00000527916 APOFQ13790 326 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 HERPUD1Q15011 391 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 METTL11BQ5VVY1 283 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 SLC36A1Q7Z2H8 476 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 KRT77Q7Z794 578 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 LDLRAD3Q86YD5 345 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 BOLLQ8N9W6 283 aaKnown RBP8.66□□□□□ -1.02
CPSF1-203ENST00000527916 SCCPDHQ8NBX0 429 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 BBS1Q8NFJ9 593 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 LRRC29Q8WV35 223 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 ASB17Q8WXJ9 295 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 OR5P3Q8WZ94 311 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
CPSF1-203ENST00000527916 LYZL4Q96KX0 146 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 WDFY2Q96P53 400 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 MNTQ99583 582 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 RTL8AQ9BWD3 113 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 PAPOLGQ9BWT3 736 aaKnown RBP8.66□□□□□ -1.02
CPSF1-203ENST00000527916 MROQ9BYG7 248 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 DNTTIP1Q9H147 329 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 CNTD2Q9H8S5 307 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 SMURF1Q9HCE7 757 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 KLHDC2Q9Y2U9 406 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 FAM96BQ9Y3D0 163 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 LRP12Q9Y561 859 aa8.66□□□□□ -1.02
CPSF1-203ENST00000527916 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 CCDC182A6NF36 153 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 G3V2T6 193 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.65□□□□□ -1.02
CPSF1-203ENST00000527916 CDIPTO14735 213 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 FCN3O75636 299 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 IGLV3-1P01715 115 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 ACKR3P25106 362 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 MAP2K3P46734 347 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 TGM4P49221 684 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 PRDX4Q13162 271 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 ATP6AP1Q15904 470 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 ZBTB37Q5TC79 503 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 LCN1P1Q5VSP4 162 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 BTN2A1Q7KYR7 527 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 ZNF679Q8IYX0 411 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 LY6G5BQ8NDX9 201 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 OR8B12Q8NGG6 310 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 PIGCQ92535 297 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 HIST1H2AAQ96QV6 131 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 OR8B4Q96RC9 309 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 SIRPDQ9H106 197 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 PPP1R3EQ9H7J1 279 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 FAM206AQ9NX38 181 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 HAO2Q9NYQ3 351 aa8.65□□□□□ -1.02
CPSF1-203ENST00000527916 CAB39Q9Y376 341 aaPredicted RBP8.65□□□□□ -1.02
CPSF1-203ENST00000527916 A0A0U1RQK1 487 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 TMEM269A0A1B0GVZ9 245 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 ANKRD61A6NGH8 418 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 ZAR1LA6NP61 321 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 ZNF850A8MQ14 1090 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 PRKYO43930 277 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 AMY2BP19961 511 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 FASP25445 335 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 HCCSP53701 268 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 ACTR3P61158 418 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 CSNK2BP67870 215 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 GFOD2Q3B7J2 385 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 CEACAM21Q3KPI0 293 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 OXLD1Q5BKU9 147 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 WDR38Q5JTN6 314 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 AADACL4Q5VUY2 407 aa8.64□□□□□ -1.03
CPSF1-203ENST00000527916 SLX4IPQ5VYV7 408 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms