RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 MEGF9Q9H1U4 602 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 NLKQ9UBE8 527 aa19.19■□□□□ 0.66
CPSF1-202ENST00000527827 SF3B6Q9Y3B4 125 aaKnown RBP19.19■□□□□ 0.66
CPSF1-202ENST00000527827 IGKV1D-17A0A075B6S4 117 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 MEGF11A6BM72 1044 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 FAM183AA6NL82 134 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 OR2AT4A6NND4 320 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 RIIAD1A6NNX1 92 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 IFNGP01579 166 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 GSTT1P30711 240 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 MAGEA2P43356 314 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 TIGD4Q8IY51 512 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 KLHDC1Q8N7A1 406 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 OR51G2Q8NGK0 314 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 OR4C13Q8NGP0 309 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 PIGCQ92535 297 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 LYZL4Q96KX0 146 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 ABCB9Q9NP78 766 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 CMC2Q9NRP2 79 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 ZNF222Q9UK12 451 aa19.18■□□□□ 0.66
CPSF1-202ENST00000527827 RHBDL1O75783 438 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 H2BFMP0C1H6 154 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 PAX6P26367 422 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 FAM189A2Q15884 450 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 LRRC75BQ2VPJ9 315 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 KCTD8Q6ZWB6 473 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 SHFQ7M4L6 423 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 ZNRF1Q8ND25 227 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 DGCR6LQ9BY27 220 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 FAM234AQ9H0X4 552 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 RANBP3Q9H6Z4 567 aaPredicted RBP19.17■□□□□ 0.66
CPSF1-202ENST00000527827 VNN3Q9NY84 501 aa19.17■□□□□ 0.66
CPSF1-202ENST00000527827 ANGPTL7O43827 346 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 GLCEO94923 617 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 PSG2P11465 335 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 ZNF3P17036 446 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 GLRA1P23415 457 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 GABRA2P47869 451 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 OR5D13Q8NGL4 314 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 OR2T6Q8NHC8 308 aa19.16■□□□□ 0.66
CPSF1-202ENST00000527827 TRBV23-1A0A0A0MS06 115 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 H0YAE9 185 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 ATP6V1B2P21281 511 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 AANATQ16613 207 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 CYP2R1Q6VVX0 501 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 ZDHHC23Q8IYP9 409 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 TMEM185AQ8NFB2 350 aa19.15■□□□□ 0.66
CPSF1-202ENST00000527827 PIN1P1O15428 100 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 CHST1O43916 411 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 GPM6AP51674 278 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 REC114Q7Z4M0 266 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 CPLX4Q7Z7G2 160 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.14■□□□□ 0.65
CPSF1-202ENST00000527827 MKXQ8IYA7 352 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 FAM185AQ8N0U4 392 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 IQCF1Q8N6M8 205 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 OR8B12Q8NGG6 310 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 PIFOQ8TCI5 191 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 CLPTM1LQ96KA5 538 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 RAB18Q9NP72 206 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 C19orf12Q9NSK7 152 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 U3KQV3 271 aa19.14■□□□□ 0.65
CPSF1-202ENST00000527827 LYNP07948 512 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 MICAQ29983 383 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 KRT74Q7RTS7 529 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 LYG1Q8N1E2 194 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 PAPD5Q8NDF8 572 aaKnown RBP19.13■□□□□ 0.65
CPSF1-202ENST00000527827 OTOSQ8NHW6 89 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 THEM6Q8WUY1 208 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 OTULINQ96BN8 352 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 SDSLQ96GA7 329 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 OR51I2Q9H344 312 aa19.13■□□□□ 0.65
CPSF1-202ENST00000527827 TCRBV5S2A0A599 114 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 SELENOFO60613 162 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 ALX3O95076 343 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 VSIG10L2P0DP72 767 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 SPATS1Q496A3 300 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 DEFB107AQ8IZN7 70 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 C11orf42Q8N5U0 333 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 PPP1R14AQ96A00 147 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 HIST1H2AAQ96QV6 131 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 NIPSNAP1Q9BPW8 284 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 NPFFR1Q9GZQ6 430 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 OR51V1Q9H2C8 321 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 YY1AP1Q9H869 796 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 ACTR3BQ9P1U1 418 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 KLHDC2Q9Y2U9 406 aa19.12■□□□□ 0.65
CPSF1-202ENST00000527827 ZNF732B4DXR9 585 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 PSMA6P60900 246 aaKnown RBP19.11■□□□□ 0.65
CPSF1-202ENST00000527827 GNG3P63215 75 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 HSP90B2PQ58FF3 399 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 OXLD1Q5BKU9 147 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 OR2T5Q6IEZ7 315 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 CD300LDQ6UXZ3 194 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 OR2T29Q8NH02 315 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 OR5K1Q8NHB7 308 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 ARL8BQ9NVJ2 186 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 TAS2R1Q9NYW7 299 aa19.11■□□□□ 0.65
CPSF1-202ENST00000527827 SAMHD1Q9Y3Z3 626 aaKnown RBP19.11■□□□□ 0.65
CPSF1-202ENST00000527827 SNX3O60493 162 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms