RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RNASEK-C17orf49H0YIS7 233 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 E2F6O75461 281 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 GLRA1P23415 457 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 KLRD1Q13241 179 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 BLMHQ13867 455 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZNF788Q6ZQV5 615 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 Q6ZSV7 163 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 Q8N7P7 452 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 PAPD5Q8NDF8 572 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 ASB9Q96DX5 294 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 LYZL4Q96KX0 146 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 RBM4BQ9BQ04 359 aaKnown RBP18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 TEX12Q9BXU0 123 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 NIPAL2Q9H841 368 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 LAMP5Q9UJQ1 280 aa18.37■□□□□ 0.53
TRAPPC4-208ENST00000527680 ANKRD61A6NGH8 418 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 CLPXO76031 633 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 CALB2P22676 271 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 MAP2K3P46734 347 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 GPM6AP51674 278 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 PROK1P58294 105 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 DGUOKQ16854 277 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 ASPHD2Q6ICH7 369 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 COMMD2Q86X83 199 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 OR8B12Q8NGG6 310 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 ANGPTL6Q8NI99 470 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 C8orf46Q8TAG6 207 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 CLPTM1LQ96KA5 538 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 GAFA1Q96PS6 74 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZNRD1Q9P1U0 126 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 NLKQ9UBE8 527 aa18.36■□□□□ 0.53
TRAPPC4-208ENST00000527680 ARRDC5A6NEK1 342 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 OR2AT4A6NND4 320 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 PRODHO43272 600 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 ACAA1P09110 424 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 OSMP13725 252 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 TGFBR2P37173 567 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 HCCSP53701 268 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 PSMA6P60900 246 aaKnown RBP18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 FAM76BQ5HYJ3 339 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 CEP78Q5JTW2 689 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 C1orf122Q6ZSJ8 110 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 THAP5Q7Z6K1 395 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 TMEM179BQ7Z7N9 219 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 PNKDQ8N490 385 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZNF671Q8TAW3 534 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 DUS3LQ96G46 650 aaKnown RBP18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 VPREB3Q9UKI3 123 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 KLHDC2Q9Y2U9 406 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 LRP12Q9Y561 859 aa18.35■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZNF816-ZNF321PA0A0X1KG74 233 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZNF732B4DXR9 585 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 H0YAE9 185 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 SAA4P35542 130 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 UBE2E1P51965 193 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 SLC35D3Q5M8T2 416 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 NCR3LG1Q68D85 454 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 ADGRG5Q8IZF4 528 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 BBS1Q8NFJ9 593 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 CANT1Q8WVQ1 401 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 HPSE2Q8WWQ2 592 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 THTPAQ9BU02 230 aa18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 METTL8Q9H825 291 aaKnown RBP18.34■□□□□ 0.53
TRAPPC4-208ENST00000527680 TMEM269A0A1B0GVZ9 245 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 M0R1W7 72 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 PSMD9O00233 223 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 SIGLEC5O15389 551 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 GSC2O15499 205 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 RHBDL1O75783 438 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 ALOX5APP20292 161 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 PRKACGP22612 351 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 CAPZA1P52907 286 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 CAV3P56539 151 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 GNG3P63215 75 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 CDK5Q00535 292 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 DMRTC1Q5HYR2 192 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 KCTD18Q6PI47 426 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 MOB3CQ70IA8 216 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 ZNRF1Q8ND25 227 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 TMEM185AQ8NFB2 350 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 OR5R1Q8NH85 324 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 FGF23Q9GZV9 251 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 PPA2Q9H2U2 334 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 C16orf95Q9H693 158 aa18.33■□□□□ 0.52
TRAPPC4-208ENST00000527680 DCTDP32321 178 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 APOFQ13790 326 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 CEACAM21Q3KPI0 293 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 TMEM236Q5W0B7 351 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 HS3ST5Q8IZT8 346 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 FAM185AQ8N0U4 392 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 CCDC197Q8NCU1 140 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 FAM110DQ8TAY7 271 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 TNFRSF14Q92956 283 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 MROQ9BYG7 248 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 OR51I2Q9H344 312 aa18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 ELL3Q9HB65 397 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 SF3B6Q9Y3B4 125 aaKnown RBP18.32■□□□□ 0.52
TRAPPC4-208ENST00000527680 SLC22A31A6NKX4 558 aa18.31■□□□□ 0.52
TRAPPC4-208ENST00000527680 TSPAN9O75954 239 aa18.31■□□□□ 0.52
TRAPPC4-208ENST00000527680 T-ENOLP0DO92 83 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms