RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 OR5P3Q8WZ94 311 aa13.11□□□□□ -0.31
PTPRU-210ENST00000527027 CLPTM1LQ96KA5 538 aa13.11□□□□□ -0.31
PTPRU-210ENST00000527027 IL1RAPQ9NPH3 570 aa13.11□□□□□ -0.31
PTPRU-210ENST00000527027 MAGEL2Q9UJ55 1249 aa13.11□□□□□ -0.31
PTPRU-210ENST00000527027 OR2AT4A6NND4 320 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 ZNF850A8MQ14 1090 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 XPNPEP2O43895 674 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 KRT36O76013 467 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 VSIG10L2P0DP72 767 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 CLUP10909 449 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 EMX1Q04741 257 aaPredicted RBP13.1□□□□□ -0.31
PTPRU-210ENST00000527027 PRDX4Q13162 271 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 RNF170Q96K19 258 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 TSSK6Q9BXA6 273 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 DNAJC27Q9NZQ0 273 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 NLKQ9UBE8 527 aa13.1□□□□□ -0.31
PTPRU-210ENST00000527027 TRBV23-1A0A0A0MS06 115 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 ANGPTL7O43827 346 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 CST4P01036 141 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 GASTP01350 101 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 GABRA2P47869 451 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 LINC01590Q5TEZ4 76 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 C16orf89Q6UX73 402 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 KCTD8Q6ZWB6 473 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 ZNRF1Q8ND25 227 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 OR4S1Q8NGB4 309 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 OR9Q2Q8NGE9 314 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 PGAM5Q96HS1 289 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 NSMCE2Q96MF7 247 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 BTBD10Q9BSF8 475 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 NECAP2Q9NVZ3 263 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
PTPRU-210ENST00000527027 HSD17B1P14061 328 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 GLRA1P23415 457 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 ACKR3P25106 362 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 DCTDP32321 178 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 MSX2P35548 267 aaPredicted RBP13.08□□□□□ -0.32
PTPRU-210ENST00000527027 OPRL1P41146 370 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 NSUN5P1Q3KNT7 163 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 LIAT1Q6ZQX7 453 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 TIGD4Q8IY51 512 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 LYG1Q8N1E2 194 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 PAPD5Q8NDF8 572 aaKnown RBP13.08□□□□□ -0.32
PTPRU-210ENST00000527027 OR4Q3Q8NH05 313 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 PIFOQ8TCI5 191 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 PIGCQ92535 297 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 SGCDQ92629 289 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 HIST1H2AAQ96QV6 131 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 INTS14Q96SY0 518 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 FGF23Q9GZV9 251 aaPredicted RBP13.08□□□□□ -0.32
PTPRU-210ENST00000527027 ELL3Q9HB65 397 aaPredicted RBP13.08□□□□□ -0.32
PTPRU-210ENST00000527027 LYVE1Q9Y5Y7 322 aa13.08□□□□□ -0.32
PTPRU-210ENST00000527027 IGKV1D-17A0A075B6S4 117 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 MEGF11A6BM72 1044 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 TNFRSF11BO00300 401 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 CHST1O43916 411 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 IFNGP01579 166 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 H2BFMP0C1H6 154 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 PSG2P11465 335 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 PAX6P26367 422 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 SAMD4BQ5PRF9 694 aaKnown RBP13.07□□□□□ -0.32
PTPRU-210ENST00000527027 ZNF770Q6IQ21 691 aaPredicted RBP13.07□□□□□ -0.32
PTPRU-210ENST00000527027 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 SHFQ7M4L6 423 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 ERI1Q8IV48 349 aaKnown RBP13.07□□□□□ -0.32
PTPRU-210ENST00000527027 MKXQ8IYA7 352 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 FAM185AQ8N0U4 392 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 TMEM185AQ8NFB2 350 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 OR2T33Q8NG76 320 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 HPSE2Q8WWQ2 592 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 AMELYQ99218 206 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 C1orf21Q9H246 121 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 HEXA-AS1Q9H8Q6 139 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 ARL8BQ9NVJ2 186 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 ZNF222Q9UK12 451 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 DNAH3Q8TD57 4116 aa13.07□□□□□ -0.32
PTPRU-210ENST00000527027 RIIAD1A6NNX1 92 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 ARPC2O15144 300 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 FBXO24O75426 580 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 RHBDL1O75783 438 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 GLCEO94923 617 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 GSTT1P30711 240 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 BNIP1Q12981 228 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 SPATS1Q496A3 300 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.06□□□□□ -0.32
PTPRU-210ENST00000527027 ZDHHC23Q8IYP9 409 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 ARHGAP24Q8N264 748 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 OR5K1Q8NHB7 308 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 SDSLQ96GA7 329 aa13.06□□□□□ -0.32
PTPRU-210ENST00000527027 NKX3-1Q99801 234 aaPredicted RBP13.06□□□□□ -0.32
PTPRU-210ENST00000527027 MMP28Q9H239 520 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms