RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 MOGAT3Q86VF5 341 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 C1orf87Q8N0U7 546 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 MS4A15Q8N5U1 240 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 OR11L1Q8NGX0 322 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CCL17Q92583 94 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 FCGR1BQ92637 280 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 FGGYQ96C11 551 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 TIMD4Q96H15 378 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 RNF170Q96K19 258 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 FGF23Q9GZV9 251 aaPredicted RBP17.51■□□□□ 0.39
CD44-222ENST00000526025 CACNG2Q9Y698 323 aa17.51■□□□□ 0.39
CD44-222ENST00000526025 CR1P17927 2039 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 A0A096LNT2 108 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 LRP5LA4QPB2 252 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 LMX1BO60663 402 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 THBS2P35442 1172 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 MAP2K4P45985 399 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 GPR6P46095 362 aaPredicted RBP17.5■□□□□ 0.39
CD44-222ENST00000526025 RPS11P62280 158 aaKnown RBP eCLIP17.5■□□□□ 0.39
CD44-222ENST00000526025 EMX1Q04741 257 aaPredicted RBP17.5■□□□□ 0.39
CD44-222ENST00000526025 MPPED2Q15777 294 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 CEP78Q5JTW2 689 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 PRAMEF6Q5VXH4 476 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 PEG10Q86TG7 708 aaKnown RBP17.5■□□□□ 0.39
CD44-222ENST00000526025 SERPINA12Q8IW75 414 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 SPARTQ8N0X7 666 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 ZFP41Q8N8Y5 198 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 DNAAF1Q8NEP3 725 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 TSEN15Q8WW01 171 aaKnown RBP17.5■□□□□ 0.39
CD44-222ENST00000526025 UFD1Q92890 307 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 SPSB1Q96BD6 273 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 BPESC1Q9GZL8 116 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 GPR173Q9NS66 373 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 SLC7A11Q9UPY5 501 aa17.5■□□□□ 0.39
CD44-222ENST00000526025 YLPM1P49750 1951 aaKnown RBP17.49■□□□□ 0.39
CD44-222ENST00000526025 TMEM178BH3BS89 294 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 H3BSH0 61 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 IRF2P14316 349 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 PMELP40967 661 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 GPM6AP51674 278 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 UBE2V2Q15819 145 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 Q499Y3 187 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 UBE2UQ5VVX9 321 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 C11orf53Q8IXP5 236 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 OR10Z1Q8NGY1 313 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 RAB1CQ92928 201 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 MGLLQ99685 303 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 OR51I2Q9H344 312 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 NEK6Q9HC98 313 aa17.49■□□□□ 0.39
CD44-222ENST00000526025 ZNF469Q96JG9 3925 aaPredicted RBP17.49■□□□□ 0.39
CD44-222ENST00000526025 PQLC2LA1A4F0 135 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 TRIM64BA6NI03 449 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 A6NIN4 97 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 ZNF732B4DXR9 585 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 PPIHO43447 177 aaKnown RBP17.48■□□□□ 0.39
CD44-222ENST00000526025 GRPP07492 148 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 OCM2P0CE71 109 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 CPEP16870 476 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 PCMT1P22061 227 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 PRKACBP22694 351 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 FUT6P51993 359 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 LOXL1Q08397 574 aaPredicted RBP17.48■□□□□ 0.39
CD44-222ENST00000526025 TRAM1Q15629 374 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 ZNF529Q6P280 563 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 OR5D14Q8NGL3 314 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 ZNF420Q8TAQ5 688 aaPredicted RBP17.48■□□□□ 0.39
CD44-222ENST00000526025 TMEM106AQ96A25 262 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 OPALINQ96PE5 141 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 REG4Q9BYZ8 158 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 ZCCHC4Q9H5U6 513 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 ZNF696Q9H7X3 374 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 UFSP2Q9NUQ7 469 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 RNF7Q9UBF6 113 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 NPTNQ9Y639 398 aa17.48■□□□□ 0.39
CD44-222ENST00000526025 A6NLC8 198 aa17.47■□□□□ 0.39
CD44-222ENST00000526025 ATF1P18846 271 aa17.47■□□□□ 0.39
CD44-222ENST00000526025 PSMA1P25786 263 aaKnown RBP17.47■□□□□ 0.39
CD44-222ENST00000526025 KCTD8Q6ZWB6 473 aa17.47■□□□□ 0.39
CD44-222ENST00000526025 ZNF573Q86YE8 665 aa17.47■□□□□ 0.39
CD44-222ENST00000526025 C1orf123Q9NWV4 160 aa17.47■□□□□ 0.39
CD44-222ENST00000526025 WIPI2Q9Y4P8 454 aa17.47■□□□□ 0.39
CD44-222ENST00000526025 CELSR1Q9NYQ6 3014 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 PNMA8CA0A1B0GUJ8 204 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 LHBP01229 141 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 IGHV2-70P01814 119 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 HSMCR30P0CW71 290 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 USF1P22415 310 aaPredicted RBP17.46■□□□□ 0.39
CD44-222ENST00000526025 MPZP25189 248 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 MAPK3P27361 379 aaPredicted RBP17.46■□□□□ 0.39
CD44-222ENST00000526025 TMEM155Q4W5P6 130 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 WDR82Q6UXN9 313 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 SCCPDHQ8NBX0 429 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 COX4I2Q96KJ9 171 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 NR1H4Q96RI1 486 aaPredicted RBP17.46■□□□□ 0.39
CD44-222ENST00000526025 TMUB1Q9BVT8 246 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 DCAF16Q9NXF7 216 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 TREM2Q9NZC2 230 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 HIVEP1P15822 2718 aa17.46■□□□□ 0.39
CD44-222ENST00000526025 ACANP16112 2415 aa17.46■□□□□ 0.38
CD44-222ENST00000526025 TRBV5-7A0A0A0MS05 114 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms