RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TSTD3H0UI37 97 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TNFRSF11BO00300 401 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TNFSF12O43508 249 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ICOSLGO75144 302 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 SUPT3HO75486 399 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 VENTXO95231 258 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 CRYZL1O95825 349 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 CLDN1O95832 211 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 NUDT14O95848 222 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 AKR1C4P17516 323 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 USF1P22415 310 aaPredicted RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 F2RP25116 425 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 GPX4P36969 197 aaPredicted RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 SRP9P49458 86 aaKnown RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 GSK3BP49841 420 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 GPM6AP51674 278 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 DVL1P1P54792 670 aaPredicted RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 CDKN2DP55273 166 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 AP1S2P56377 157 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 RAB25P57735 213 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR12D2P58182 307 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 SNRPD1P62314 119 aaKnown RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 MS4A2Q01362 244 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ZNF45Q02386 682 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 EDDM3AQ14507 147 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 CLINT1Q14677 625 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR7A5Q15622 319 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TAB1Q15750 504 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 HIST3H3Q16695 136 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 IZUMO4Q1ZYL8 232 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 LRRC75BQ2VPJ9 315 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 PYCR3Q53H96 274 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TMEM97Q5BJF2 176 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ZNF57Q68EA5 555 aaPredicted RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 FAM71E1Q6IPT2 247 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 AMIGO2Q86SJ2 522 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TMEM135Q86UB9 458 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 VRK3Q8IV63 474 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 GPD1LQ8N335 351 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ZNF843Q8N446 348 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 PNKDQ8N490 385 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ZADH2Q8N4Q0 377 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR52E4Q8NGH9 312 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR4C13Q8NGP0 309 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR10K1Q8NGX5 313 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 RNASE11Q8TAA1 199 aaKnown RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 STOML3Q8TAV4 291 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 Q8WTZ3 238 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 EEF1AKMT1Q8WVE0 214 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ZNRF4Q8WWF5 429 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 MAGEB18Q96M61 343 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 DUX3Q96PT4 197 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 P2RX4Q99571 388 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TSC22D3Q99576 134 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 MCHR1Q99705 422 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 RHNO1Q9BSD3 238 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 RIMS3Q9UJD0 308 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 OR52A1Q9UKL2 312 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 MMP17Q9ULZ9 603 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 SLC22A7Q9Y694 548 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 TMEM56-RWDD3S4R434 201 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 GOLGB1Q14789 3259 aaKnown RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 CPSF1Q10570 1443 aaKnown RBP3.68□□□□□ -1.82
CD44-213ENST00000525209 TNS2Q63HR2 1409 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 C5P01031 1676 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 QRICH2Q9H0J4 1663 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 ADAMTS20P59510 1910 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 PCDH11XQ9BZA7 1347 aa3.68□□□□□ -1.82
CD44-213ENST00000525209 DAPL1A0PJW8 107 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ZNF98A6NK75 572 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 NCBP2LA6PVI3 153 aaKnown RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 B4DXG7 233 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 GABRPO00591 440 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 BET1O15155 118 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 MBTPS2O43462 519 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 RGS14O43566 566 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 MGRN1O60291 552 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 PLIN3O60664 434 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 CNMDO75829 334 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 KLF8O95600 359 aaPredicted RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 IGHV4-39P01824 125 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 CD55P08174 381 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ADRB3P13945 408 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 LIFP15018 202 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 PAX1P15863 534 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 TCP1P17987 556 aaKnown RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 PRKACGP22612 351 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 FCGR2CP31995 323 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 PYCR1P32322 319 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 RARRES1P49788 294 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 PDLIM4P50479 330 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 EFNA3P52797 238 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 CRYBA2P53672 197 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 TAS2R41P59536 307 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 ARG2P78540 354 aa3.67□□□□□ -1.82
CD44-213ENST00000525209 MRPS11P82912 194 aaKnown RBP3.67□□□□□ -1.82
CD44-213ENST00000525209 ZNF91Q05481 1191 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms