RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 IFNA2P01563 188 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 IGLV3-1P01715 115 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ISG15P05161 165 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 CD2P06729 351 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 GNAO1P09471 354 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 MUC1P15941 1255 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 CCL1P22362 96 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRKACBP22694 351 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ANOS1P23352 680 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 IL2RGP31785 369 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 CD80P33681 288 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 SRP14P37108 136 aaKnown RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 VHLP40337 213 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 KIR3DL2P43630 455 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 PITPNBP48739 271 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 TGM4P49221 684 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 LMO4P61968 165 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 GNB2P62879 340 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ST3GAL4Q11206 333 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ALKBH1Q13686 389 aaKnown RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 SMIM21Q3B7S5 101 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 CHRFAM7AQ494W8 412 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF404Q494X3 552 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 CCDC58Q4VC31 144 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 DCAF12L2Q5VW00 463 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 SFRP4Q6FHJ7 346 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 FIP1L1Q6UN15 594 aaKnown RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 BTNL3Q6UXE8 466 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 AHSA2Q719I0 299 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 SLC36A1Q7Z2H8 476 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 PRSS35Q8N3Z0 413 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 DEFB108BQ8NET1 73 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR10Z1Q8NGY1 313 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR14K1Q8NGZ2 314 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR52N1Q8NH53 320 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR5AK2Q8NH90 309 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 NRG4Q8WWG1 115 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 C12orf43Q96C57 262 aaKnown RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 BORCS8Q96FH0 119 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 C1orf159Q96HA4 380 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 MRI1Q9BV20 369 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 MND1Q9BWT6 205 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 SSBP3Q9BWW4 388 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 PATZ1Q9HBE1 687 aaKnown RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 GPR173Q9NS66 373 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 PLCXD1Q9NUJ7 323 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 HIF1ANQ9NWT6 349 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM160Q9NX00 188 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 DCAF16Q9NXF7 216 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 FRRS1LQ9P0K9 344 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ERVK-18Q9QC07 812 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 CLN8Q9UBY8 286 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 DHDHQ9UQ10 334 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ERGIC3Q9Y282 383 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 RRP15Q9Y3B9 282 aaKnown RBP4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 TPRKBQ9Y3C4 175 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 ARID1AO14497 2285 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 TACC2O95359 2948 aa4.54□□□□□ -1.68
HMGB1P40-201ENST00000525121 F8P00451 2351 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 A0A1B0GTI1 187 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 SRRM5B3KS81 715 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAM157AC9JC47 383 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 PTGES3LE9PB15 166 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 J3QLI3 93 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 J3QT63 122 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 SLC1A7O00341 560 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CDIPTO14735 213 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 WNT9BO14905 357 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMPRSS2O15393 492 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ADAM20O43506 726 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 PLPP2O43688 288 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 XPNPEP2O43895 674 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 NXPH2O95156 264 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 LIMS3P0CW19 117 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 LIMS4P0CW20 117 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 SRD5A1P18405 259 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 MYF6P23409 242 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 GLRA1P23415 457 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 EEF1B2P24534 225 aaKnown RBP4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 THBS2P35442 1172 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CFHR2P36980 270 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 HAAOP46952 286 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 RBP2P50120 134 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 NPY4RP50391 375 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ETV1P50549 477 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FUT6P51993 359 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ATP1B3P54709 279 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 WNT4P56705 351 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 GMFBP60983 142 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 PPP3R1P63098 170 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 LCN2P80188 198 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 KRTAP1-1Q07627 177 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CDK5R1Q15078 307 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CR1LQ2VPA4 569 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAM201AQ5SY85 155 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 C6orf141Q5SZD1 244 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAM120AOSQ5T036 256 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CD276Q5ZPR3 534 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM42Q69YG0 159 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAHD2BQ6P2I3 314 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms