RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SPATA46Q5T0L3 261 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 CCNJQ5T5M9 372 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 LCN1P1Q5VSP4 162 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 ZNF770Q6IQ21 691 aaPredicted RBP5.26□□□□□ -1.57
NEDD8-203ENST00000524927 C4orf22Q6V702 233 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 SLC16A9Q7RTY1 509 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 PRUNE1Q86TP1 453 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 NR2C2APQ86WQ0 139 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 OSR2Q8N2R0 312 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 Q8N7P7 452 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 LY6G5BQ8NDX9 201 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 OR8U1Q8NH10 309 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 SLC25A40Q8TBP6 338 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 DCAKDQ8WVC6 231 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 ANKRD49Q8WVL7 239 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 PTP4A1Q93096 173 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 OR2J1Q9GZK6 312 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 DERL2Q9GZP9 239 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 INTS9Q9NV88 658 aaKnown RBP5.26□□□□□ -1.57
NEDD8-203ENST00000524927 VNN3Q9NY84 501 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 RASD1Q9Y272 281 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 POFUT2Q9Y2G5 429 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 PRSS46E5RG02 174 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 M0R3G1 203 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 NDUFA2O43678 99 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 TIMM8AO60220 97 aaPredicted RBP5.25□□□□□ -1.57
NEDD8-203ENST00000524927 FCMRO60667 390 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 ENTPD5O75356 428 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 DFFBO76075 338 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 BRI3O95415 125 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 IGLV2-11P01706 119 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 IL3P08700 152 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 AHCYP23526 432 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 SSTR1P30872 391 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 HTR5AP47898 357 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 SNU13P55769 128 aaKnown RBP5.25□□□□□ -1.57
NEDD8-203ENST00000524927 RWDD2BP57060 319 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 LINC01547P58512 204 aaPredicted RBP5.25□□□□□ -1.57
NEDD8-203ENST00000524927 STX1BP61266 288 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 PRB3Q04118 309 aaPredicted RBP5.25□□□□□ -1.57
NEDD8-203ENST00000524927 CEACAM7Q14002 265 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 OPCMLQ14982 345 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 OR7A5Q15622 319 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 FAM201AQ5SY85 155 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 TTC27Q6P3X3 843 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 ZCCHC12Q6PEW1 402 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 Q6ZR03 302 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 DPPA2Q7Z7J5 298 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 OR10V1Q8NGI7 309 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 ZNF563Q8TA94 476 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 ZNF420Q8TAQ5 688 aaPredicted RBP5.25□□□□□ -1.57
NEDD8-203ENST00000524927 UHRF2Q96PU4 802 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 GIN1Q9NXP7 522 aa5.25□□□□□ -1.57
NEDD8-203ENST00000524927 EIF3KQ9UBQ5 218 aaKnown RBP5.25□□□□□ -1.57
NEDD8-203ENST00000524927 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 TMED7-TICAM2A0A0A6YYA0 188 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 IQCMA0A1B0GVH7 501 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 PATE4P0C8F1 98 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 ZNF43P17038 809 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 CCNA2P20248 432 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 POU3F4P49335 361 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 CEBPDP49716 269 aaPredicted RBP5.24□□□□□ -1.57
NEDD8-203ENST00000524927 GTDC1Q4AE62 458 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 XKR7Q5GH72 579 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 ANKRD46Q86W74 232 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 SKA3Q8IX90 412 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 TMEM123Q8N131 208 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 TEX9Q8N6V9 391 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 OR4Q3Q8NH05 313 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 RPS4Y2Q8TD47 263 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 GIMAP5Q96F15 307 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 GLIPR2Q9H4G4 154 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 METTL8Q9H825 291 aaKnown RBP5.24□□□□□ -1.57
NEDD8-203ENST00000524927 SRD5A3Q9H8P0 318 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 B3GAT2Q9NPZ5 323 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 TMCC3Q9ULS5 477 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 TMED7Q9Y3B3 224 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 ANGPTL3Q9Y5C1 460 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 SNX5Q9Y5X3 404 aa5.24□□□□□ -1.57
NEDD8-203ENST00000524927 TMEM72A0PK05 275 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 PSMB11A5LHX3 300 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 HDAC3O15379 428 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 ZSCAN5DPP0CG00 497 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 MLNP12872 115 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 FRKP42685 505 aaPredicted RBP5.23□□□□□ -1.57
NEDD8-203ENST00000524927 ACAA2P42765 397 aaKnown RBP5.23□□□□□ -1.57
NEDD8-203ENST00000524927 CCT3P49368 545 aaKnown RBP5.23□□□□□ -1.57
NEDD8-203ENST00000524927 SRP9P49458 86 aaKnown RBP5.23□□□□□ -1.57
NEDD8-203ENST00000524927 RAB13P51153 203 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 AQP5P55064 265 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 DLX1P56177 255 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 PPP1CBP62140 327 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 PSG7Q13046 419 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 KIR2DS1Q14954 304 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 TMEM53Q6P2H8 277 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 C20orf196Q8IYI0 205 aa5.23□□□□□ -1.57
NEDD8-203ENST00000524927 ZNF645Q8N7E2 425 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms