RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 KCNJ3P48549 501 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 GAB4Q2WGN9 574 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 BHLHA15Q7RTS1 189 aaPredicted RBP14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 SSX8Q7RTT4 187 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 OR2T6Q8NHC8 308 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 YIPF6Q96EC8 236 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 ISG20L2Q9H9L3 353 aaKnown RBP14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 FBXO34Q9NWN3 711 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 AMMECR1Q9Y4X0 333 aaPredicted RBP14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 RREB1Q92766 1687 aa14.51□□□□□ -0.09
PCDHA3-201ENST00000522353 M0R1X1 148 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 HOXB3P14651 431 aaPredicted RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 OR6X1Q8NH79 312 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 AK3Q9UIJ7 227 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 GPR31O00270 319 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 LRP3O75074 770 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 PDGFAP04085 211 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 TIGITQ495A1 244 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 DBX2Q6ZNG2 339 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 CCDC71Q8IV32 467 aaPredicted RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 MTCH1Q9NZJ7 389 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 RAB7AP51149 207 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 PRRX1P54821 245 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 TMEM182Q6ZP80 229 aaPredicted RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 MFSD4AQ8N468 514 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 LRRC29Q8WV35 223 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 ASB13Q8WXK3 278 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 ACTR3CQ9C0K3 210 aaPredicted RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 BARX1Q9HBU1 254 aaPredicted RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 A0A1B0GUH1 482 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 MOSPD3O75425 235 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 CD3DP04234 171 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 C12orf73Q69YU5 71 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 HIST2H3AQ71DI3 136 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 OR2W3Q7Z3T1 314 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 SLC38A6Q8IZM9 456 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 ARRDC1Q8N5I2 433 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 UQCC2Q9BRT2 126 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 RYDENQ9NUL5 291 aaKnown RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 OSGIN2Q9Y236 505 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 BOLA1Q9Y3E2 137 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 XKRY2A2RUG3 117 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 ZNF724A8MTY0 619 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 SSSCA1O60232 199 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 OR7C2O60412 319 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 EPXP11678 715 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 GABRB1P18505 474 aa14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 ZNF331Q9NQX6 463 aaPredicted RBP14.5□□□□□ -0.09
PCDHA3-201ENST00000522353 PLPP3O14495 311 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 COX5AP20674 150 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 MDH2P40926 338 aaKnown RBP14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 MPC1Q9Y5U8 109 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 CT62P0C5K7 136 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 IGFBP7Q16270 282 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 XRCC3O43542 346 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 OR4E1P0C645 316 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 CBLN3Q6UW01 205 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 OR4Q3Q8NH05 313 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 PSENENQ9NZ42 101 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 ASXL3Q9C0F0 2248 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 SPAG17Q6Q759 2223 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 TRAV38-1A0A0B4J264 116 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 RPL12P30050 165 aaKnown RBP14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 KISS1Q15726 138 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 CADM3Q8N126 398 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 MARCH1Q8TCQ1 289 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 PTDSS2Q9BVG9 487 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 CXXC4Q9H2H0 198 aa14.49□□□□□ -0.09
PCDHA3-201ENST00000522353 OR5H14A6NHG9 310 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 TUBAL3A6NHL2 446 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 SPINT1O43278 529 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 MAGEA5P43359 124 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 SKP2Q13309 424 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 TOR2AQ5JU69 321 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 CLDN23Q96B33 292 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 CMBLQ96DG6 245 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 C2orf50Q96LR7 162 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 FBP1P09467 338 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 PI3P19957 117 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 OR8U1Q8NH10 309 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 LY86O95711 162 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 OR13C7P0DN81 318 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 SMIM4Q8WVI0 70 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 APH1BQ8WW43 257 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 C20orf141Q9NUB4 165 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 FZR1Q9UM11 496 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 ADAM20O43506 726 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 GOSR1O95249 250 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 ZNF416Q9BWM5 594 aa14.48□□□□□ -0.09
PCDHA3-201ENST00000522353 IAPPP10997 89 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 LYG2Q86SG7 212 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 OR4S1Q8NGB4 309 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 ERGIC1Q969X5 290 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 C4orf45Q96LM5 186 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 TSPAN32Q96QS1 320 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 OCEL1Q9H607 264 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 THSD7AQ9UPZ6 1657 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 H7BYZ3 331 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 IL5P05113 134 aa14.47□□□□□ -0.09
PCDHA3-201ENST00000522353 IGHV4-34P06331 123 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms