RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GTF2H5Q6ZYL4 71 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 MSRB3Q8IXL7 192 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 OR13D1Q8NGV5 346 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 WDR90Q96KV7 1748 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 RPS27P42677 84 aaKnown RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 HES1Q14469 280 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 ISXQ2M1V0 245 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 ANKRD34AQ69YU3 496 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 CISD2Q8N5K1 135 aaKnown RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 CXorf58Q96LI9 332 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 PPP1R14DQ9NXH3 145 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 ASPDHA6ND91 283 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 HS3ST1O14792 307 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 GREM1O60565 184 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 CD3DP04234 171 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 TNFRSF1AP19438 455 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 SNRPNP63162 240 aaKnown RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 ACOT6Q3I5F7 207 aaPredicted RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 DEFB108BQ8NET1 73 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 OR4C16Q8NGL9 310 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 OR2G2Q8NGZ5 317 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 OR1F12Q8NHA8 337 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 SHISA8B8ZZ34 492 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 MMP7P09237 267 aaPredicted RBP14.49□□□□□ -0.09
USP42-207ENST00000521713 FAM74A1Q5RGS3 127 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 TRILQ7L0X0 811 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 ZNF391Q9UJN7 358 aa14.49□□□□□ -0.09
USP42-207ENST00000521713 A0A1W2PQD3 144 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 ABCD4O14678 606 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 CT62P0C5K7 136 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 MESP2Q0VG99 397 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 HAGHQ16775 308 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 LINC00303Q3SY05 128 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 OR10D3Q8NH80 312 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 PP6455Q8WZ26 134 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 ZNF355PQ9NSJ1 428 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 DVL1P1P54792 670 aaPredicted RBP14.48□□□□□ -0.09
USP42-207ENST00000521713 OR10A3P58181 314 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 TPPP2P59282 170 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 STAC2Q6ZMT1 411 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 AUNIPQ9H7T9 357 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 GLRX2Q9NS18 164 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 GP1BAP07359 652 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 HOXA1P49639 335 aaPredicted RBP14.48□□□□□ -0.09
USP42-207ENST00000521713 ZNF121P58317 390 aaPredicted RBP14.48□□□□□ -0.09
USP42-207ENST00000521713 CD81P60033 236 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 RAB35Q15286 201 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.48□□□□□ -0.09
USP42-207ENST00000521713 OR8U1Q8NH10 309 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 CA5BP1Q8WTZ4 195 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 ATG2BQ96BY7 2078 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 APC2O95996 2303 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 CACNA1CQ13936 2221 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 A0A1W2PPV9 198 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 G3V3Q6 166 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 SFTPCP11686 197 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 ZNF90Q03938 601 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 B3GNTL1Q67FW5 361 aaPredicted RBP14.48□□□□□ -0.09
USP42-207ENST00000521713 NCR3LG1Q68D85 454 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 ZDHHC22Q8N966 263 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 GPX8Q8TED1 209 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 RIMS4Q9H426 269 aaPredicted RBP14.48□□□□□ -0.09
USP42-207ENST00000521713 SLCO1C1Q9NYB5 712 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 TRIP11Q15643 1979 aa14.48□□□□□ -0.09
USP42-207ENST00000521713 ASCC3Q8N3C0 2202 aaKnown RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 LEUTXA8MZ59 168 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 LBHQ53QV2 105 aaPredicted RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 GLCCI1Q86VQ1 547 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 CATSPERDQ86XM0 798 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 ARRDC1Q8N5I2 433 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 KDF1Q8NAX2 398 aaPredicted RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 SLC35D1Q9NTN3 355 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 SLC22A13Q9Y226 551 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 NPIPB8E9PQR5 432 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 CST4P01036 141 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 PCMT1P22061 227 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 DCTDP32321 178 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 DRAM2Q6UX65 266 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 OTOSQ8NHW6 89 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 OR8B4Q96RC9 309 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 ACTR3CQ9C0K3 210 aaPredicted RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 SIRT3Q9NTG7 399 aaPredicted RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 MBD1Q9UIS9 605 aaPredicted RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 SNRPEP62304 92 aaKnown RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 PHLDA2Q53GA4 152 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 C19orf35Q6ZS72 473 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 FBXL14Q8N1E6 418 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 SMIM7Q9BQ49 75 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 ZNF71Q9NQZ8 489 aaPredicted RBP14.47□□□□□ -0.09
USP42-207ENST00000521713 RAB27BO00194 218 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 RAC3P60763 192 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 SLC38A9Q8NBW4 561 aa14.47□□□□□ -0.09
USP42-207ENST00000521713 SEC16AO15027 2179 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 ELOA3CA0A087WX78 387 aaPredicted RBP14.46□□□□□ -0.09
USP42-207ENST00000521713 CBY3A6NI87 242 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 SMIM21Q3B7S5 101 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 C2orf76Q3KRA6 126 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 TMEM128Q5BJH2 165 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 ZNF787Q6DD87 383 aa14.46□□□□□ -0.09
USP42-207ENST00000521713 GPR32P1Q8NGA4 272 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms