RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CCNJQ5T5M9 372 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 REP15Q6BDI9 236 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SULT1C3Q6IMI6 304 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4L9Q6RFH8 374 aaPredicted RBP3.01□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM107Q6UX40 140 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 LYPD2Q6UXB3 125 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 Q6ZR03 302 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 C3orf62Q6ZUJ4 267 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 CREB3L2Q70SY1 520 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 CROCCP3Q8IVE0 287 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF614Q8N883 585 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 OR11H4Q8NGC9 324 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 OR9K2Q8NGE7 335 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 FAM81AQ8TBF8 368 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ACMSDQ8TDX5 336 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 CHPT1Q8WUD6 406 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 TNFRSF14Q92956 283 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ITFG2Q969R8 447 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 LGALS12Q96DT0 336 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 URB1-AS1Q96HZ7 61 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 PAIP2Q9BPZ3 127 aaKnown RBP3.01□□□□□ -1.93
VPS13B-208ENST00000521037 NEURL2Q9BR09 285 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 LINC00470Q9BZP3 86 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 PPA2Q9H2U2 334 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 GLIPR2Q9H4G4 154 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 WDR41Q9HAD4 459 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 PALMDQ9NP74 551 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 EXD2Q9NVH0 621 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 NDE1Q9NXR1 346 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 TAS2R1Q9NYW7 299 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DUX4Q9UBX2 424 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 DAPK2Q9UIK4 370 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 SLC9A8Q9Y2E8 581 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 ACOT9Q9Y305 439 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 OR10H1Q9Y4A9 318 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 GMEB1Q9Y692 573 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 KCNE3Q9Y6H6 103 aa3.01□□□□□ -1.93
VPS13B-208ENST00000521037 LRP1Q07954 4544 aaKnown RBP3.01□□□□□ -1.93
VPS13B-208ENST00000521037 LRP2P98164 4655 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 A0A0G2JND7 137 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 TMEM272A0A1B0GTI8 110 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 XKRY2A2RUG3 117 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 H0YJX3 145 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 SULT2B1O00204 365 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 COPEO14579 308 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CHEK1O14757 476 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CASQ2O14958 399 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 SPAG7O75391 227 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 DEDDO75618 318 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 DUS4LO95620 317 aaKnown RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 APOHP02749 345 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 LIPFP07098 398 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CHRNGP07510 517 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 LYNP07948 512 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 IL3P08700 152 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 IFI6P09912 130 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 OR8G3PP0DMU2 310 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 MLNP12872 115 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 MYOD1P15172 320 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 MPV17P39210 176 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 PMELP40967 661 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 NKX2-1P43699 371 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 RFX2P48378 723 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINB8P50452 374 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CLDN17P56750 224 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 BTG1P62324 171 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 SLC35A2P78381 396 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 PRB3Q04118 309 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 TRAP1Q12931 704 aaKnown RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 MED21Q13503 144 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ANKRD55Q3KP44 614 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 LIN52Q52LA3 116 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 METTL21CQ5VZV1 264 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 LIPJQ5W064 366 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 HCP5Q6MZN7 132 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 C3orf33Q6P1S2 294 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 C8orf82Q6P1X6 216 aaPredicted RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 ZFP1Q6P2D0 407 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 C10orf99Q6UWK7 81 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 TIFABQ6ZNK6 161 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 C18orf65Q6ZTR6 163 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ISCA2Q86U28 154 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ZDHHC21Q8IVQ6 265 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 CDH26Q8IXH8 852 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ZBED8Q8IZ13 594 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 KIRREL3Q8IZU9 778 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 GPR137CQ8N3F9 429 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 PNKDQ8N490 385 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 OR5W2Q8NH69 310 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 PIGXQ8TBF5 258 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 TCP10LQ8TDR4 215 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 FCGR1BQ92637 280 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 UBE2E3Q969T4 207 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 DGCR14Q96DF8 476 aaKnown RBP3□□□□□ -1.93
VPS13B-208ENST00000521037 CMTM5Q96DZ9 223 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ZNF583Q96ND8 569 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 AMDHD1Q96NU7 426 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ZBTB18Q99592 522 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 ECSITQ9BQ95 431 aa3□□□□□ -1.93
VPS13B-208ENST00000521037 SLC25A33Q9BSK2 321 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms