RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 UPK1BO75841 260 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 IGLV2-8P01709 118 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 ASGR1P07306 291 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 MMP7P09237 267 aaPredicted RBP1.54□□□□□ -2.16
SKP1-207ENST00000520417 THRAP10827 490 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 PMCHP20382 165 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 GABRR2P28476 465 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 PRSS3P35030 304 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 ARL2P36404 184 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 CLDN18P56856 261 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 ATP6V0D1P61421 351 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 ELF3P78545 371 aaPredicted RBP1.54□□□□□ -2.16
SKP1-207ENST00000520417 INCA1Q0VD86 236 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 ADIGQ0VDE8 80 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 WDR43Q15061 677 aaKnown RBP eCLIP1.54□□□□□ -2.16
SKP1-207ENST00000520417 MAPRE2Q15555 327 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 C5orf64Q2M2E5 130 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 HHATQ5VTY9 493 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 TTC19Q6DKK2 380 aaPredicted RBP1.54□□□□□ -2.16
SKP1-207ENST00000520417 OTUD6AQ7L8S5 288 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 TMCO2Q7Z6W1 182 aaPredicted RBP1.54□□□□□ -2.16
SKP1-207ENST00000520417 DAZ4Q86SG3 579 aaKnown RBP1.54□□□□□ -2.16
SKP1-207ENST00000520417 BBS7Q8IWZ6 715 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 WDR31Q8NA23 367 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 AGR3Q8TD06 166 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 GPX8Q8TED1 209 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 PIH1D2Q8WWB5 315 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 S100PBPQ96BU1 408 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 CSPG4P5Q96PW8 444 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 AGMATQ9BSE5 352 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 TBL1XR1Q9BZK7 514 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 LINC00574Q9H8X3 128 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 CD209Q9NNX6 404 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 DAZ1Q9NQZ3 744 aaKnown RBP1.54□□□□□ -2.16
SKP1-207ENST00000520417 HEBP1Q9NRV9 189 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 TMEM100Q9NV29 134 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 RAB22AQ9UL26 194 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 ZNF257Q9Y2Q1 563 aa1.54□□□□□ -2.16
SKP1-207ENST00000520417 LOC102724200A0A096LPH7 203 aaPredicted RBP1.53□□□□□ -2.16
SKP1-207ENST00000520417 HACD1B0YJ81 288 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 CLDN34H7C241 214 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 CCDC22O60826 627 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 TTC4O95801 387 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 PTTG1O95997 202 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 PFN1P07737 140 aaKnown RBP1.53□□□□□ -2.16
SKP1-207ENST00000520417 STAG3L3P0CL85 134 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 RALBP11234 206 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 NELFEP18615 380 aaKnown RBP1.53□□□□□ -2.16
SKP1-207ENST00000520417 CXCR1P25024 350 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 MPIP34949 423 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 PSMD4P55036 377 aaKnown RBP1.53□□□□□ -2.16
SKP1-207ENST00000520417 CLDN6P56747 220 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 RAB11AP62491 216 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 PAFAH1B2P68402 229 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 TSC22D1Q15714 1073 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 RAB11BQ15907 218 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 DEFB134Q4QY38 66 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 TPRG1LQ5T0D9 272 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 ULK3Q6PHR2 472 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 TBPL2Q6SJ96 375 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 FAM131AQ6UXB0 335 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 Q6ZS52 159 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 TICRRQ7Z2Z1 1910 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 PDPNQ86YL7 162 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 ADGRA3Q8IWK6 1321 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 WDR19Q8NEZ3 1342 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 PROKR2Q8NFJ6 384 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 OR52N1Q8NH53 320 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 GLYATL2Q8WU03 294 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 CERS2Q96G23 380 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 NAPGQ99747 312 aaPredicted RBP1.53□□□□□ -2.16
SKP1-207ENST00000520417 ANP32EQ9BTT0 268 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 C8orf33Q9H7E9 229 aaPredicted RBP1.53□□□□□ -2.16
SKP1-207ENST00000520417 CES1P1Q9UKY3 287 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 OR51B2Q9Y5P1 312 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 ENPP4Q9Y6X5 453 aa1.53□□□□□ -2.16
SKP1-207ENST00000520417 TRAV8-4A0A0B4J246 113 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 A0A0G2JMP0 313 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 A0A0X1KG70 313 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 NCF1BA6NI72 391 aaPredicted RBP1.52□□□□□ -2.17
SKP1-207ENST00000520417 SLC22A20A6NK97 555 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 CENPXA8MT69 81 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 NCF1CA8MVU1 366 aaPredicted RBP1.52□□□□□ -2.17
SKP1-207ENST00000520417 LINC01619G3V211 115 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 H3BN98 237 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 TRDMT1O14717 391 aaKnown RBP1.52□□□□□ -2.17
SKP1-207ENST00000520417 AKR7A2O43488 359 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 NRASP01111 189 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 HRASP01112 189 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 KRASP01116 189 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 P01737 135 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 HLA-DMAP28067 261 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 TGFBR2P37173 567 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 MTPNP58546 118 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 BIKQ13323 160 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 FAM53BQ14153 422 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 SP6Q3SY56 376 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 PIP5KL1Q5T9C9 394 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 STEAP4Q687X5 459 aa1.52□□□□□ -2.17
SKP1-207ENST00000520417 KDM4DQ6B0I6 523 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms