RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CMTM7Q96FZ5 175 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 DIRAS2Q96HU8 199 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 NARS2Q96I59 477 aaKnown RBP2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 YPEL4Q96NS1 127 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 DEFB118Q96PH6 123 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 CMSS1Q9BQ75 279 aaKnown RBP2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 NDUFAF3Q9BU61 184 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 MND1Q9BWT6 205 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 NLNQ9BYT8 704 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 NKX6-2Q9C056 277 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 MED28Q9H204 178 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 ANKRA2Q9H9E1 313 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 ISYNA1Q9NPH2 558 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 ESM1Q9NQ30 184 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 UFSP2Q9NUQ7 469 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 TXNL4BQ9NX01 149 aaKnown RBP2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 C1orf109Q9NX04 203 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 RASL12Q9NYN1 266 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 GHRLQ9UBU3 117 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLEC2DQ9UHP7 191 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 LAMP5Q9UJQ1 280 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 KLHDC2Q9Y2U9 406 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 V9GYQ6 96 aa2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 NUP210Q8TEM1 1887 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P41-201ENST00000520234 HCFC1P51610 2035 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 NLRC5Q86WI3 1866 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 KCNE1BA0A087WTH5 132 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 A0A1B0GUH1 482 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRDV1A0A1B0GX56 115 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 A0A1W2PPE3 182 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM218A2RU14 115 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RNF222A6NCQ9 220 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 LOC730098B7Z3J9 87 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MKRN2OSH3BPM6 223 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPL36A-HNRNPH2H7BZ11 118 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF593O00488 134 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 CCL22O00626 93 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 FGF16O43320 207 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 COCHO43405 550 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SDC3O75056 442 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 STK16O75716 305 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 AKR7A3O95154 331 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC25A14O95258 325 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 GJB5O95377 273 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 CLDN9O95484 217 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SOD1P00441 154 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SERPINA1P01009 418 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRBC1P01850 177 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 IGHG3P01860 377 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 APOC3P02656 99 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 C1QCP02747 245 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TCRBP04435 133 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 C8GP07360 202 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANXA5P08758 320 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 GIPP09681 153 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSPAN19P0C672 248 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MPC1LP0DKB6 136 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC2A1P11166 492 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 BCKDHAP12694 445 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PVRP15151 417 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 CPN1P15169 458 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 HIST1H1BP16401 226 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRPS1L1P21108 318 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PAICSP22234 425 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 IDSP22304 550 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 GALP22466 123 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PPIBP23284 216 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 MAPK3P27361 379 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SDC2P34741 201 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 NSG1P42857 185 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR1G1P47890 313 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SGSHP51688 502 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 XKP51811 444 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 AKR1D1P51857 326 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ACLYP53396 1101 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 METAP1P53582 386 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 CTBP2P56545 445 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB4BP61018 213 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSPAN5P62079 268 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPS24P62847 133 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF85Q03923 595 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SIGLEC14Q08ET2 396 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 DMC1Q14565 340 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 NCF4Q15080 339 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 CDNFQ49AH0 187 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ACSF3Q4G176 576 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PYDC2Q56P42 97 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 EOGTQ5NDL2 527 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 AVPI1Q5T686 147 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 ARMC12Q5T9G4 340 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 BCL2L15Q5TBC7 163 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SDHAF4Q5VUM1 108 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 C12orf73Q69YU5 71 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAET1GQ6H3X3 334 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 PYHIN1Q6K0P9 492 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 C3orf33Q6P1S2 294 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 FAM159AQ6UWV7 190 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 DNM1P46Q6ZS02 220 aa2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 EIF3MQ7L2H7 374 aaKnown RBP2.46□□□□□ -2.02
HMGB1P41-201ENST00000520234 SH2D6Q7Z4S9 175 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms