RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 RAB3DO95716 219 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 FCER2P06734 321 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 KIR2DL2P43627 348 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-212ENST00000520133 ATP1B3P54709 279 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 CBX3Q13185 183 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 ZFP69Q49AA0 526 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 PLCXD3Q63HM9 321 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 OR4D10Q8NGI6 311 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 DVL3Q92997 716 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-212ENST00000520133 DACT3Q96B18 629 aaPredicted RBP23.32■■□□□ 1.32
COL13A1-212ENST00000520133 METTL9Q9H1A3 318 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 FLVCR2Q9UPI3 526 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 CFAP47Q6ZTR5 3102 aa23.32■■□□□ 1.32
COL13A1-212ENST00000520133 HIST1H1DP16402 221 aaKnown RBP23.31■■□□□ 1.32
COL13A1-212ENST00000520133 GNG2P59768 71 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 PNLIPRP3Q17RR3 467 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 SPACA3Q8IXA5 215 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 TM2D1Q9BX74 207 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 LHX6Q9UPM6 363 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 RAD51DO75771 328 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 CPT2P23786 658 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 FTMTQ8N4E7 242 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 SLC30A7Q8NEW0 376 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 OR56B2PQ8NGI1 322 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 OR51S1Q8NGJ8 323 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 OR10K1Q8NGX5 313 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 NUDCD2Q8WVJ2 157 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 MS4A3Q96HJ5 214 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 BEX2Q9BXY8 128 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 IFT46Q9NQC8 304 aa23.31■■□□□ 1.32
COL13A1-212ENST00000520133 K7EM74 188 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 ZNF780AO75290 641 aaPredicted RBP23.3■■□□□ 1.32
COL13A1-212ENST00000520133 CD74P04233 296 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 HOXB1P14653 301 aaPredicted RBP23.3■■□□□ 1.32
COL13A1-212ENST00000520133 ARL6IP1Q15041 203 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 CD276Q5ZPR3 534 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 CSNK2A3Q8NEV1 391 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 OR5L1Q8NGL2 311 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 GPR137Q96N19 417 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 GINS4Q9BRT9 223 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 STARD10Q9Y365 291 aa23.3■■□□□ 1.32
COL13A1-212ENST00000520133 INTS1Q8N201 2190 aaKnown RBP23.3■■□□□ 1.32
COL13A1-212ENST00000520133 IGKV1-27A0A075B6S5 117 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 A0A1B0GUH1 482 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 CSTBP04080 98 aaKnown RBP23.29■■□□□ 1.32
COL13A1-212ENST00000520133 TMEM50BP56557 158 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 PER3P56645 1201 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 RSU1Q15404 277 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 TBC1D28Q2M2D7 210 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 PLEKHN1Q494U1 663 aaPredicted RBP23.29■■□□□ 1.32
COL13A1-212ENST00000520133 PLAC9Q5JTB6 97 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 METTL11BQ5VVY1 283 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 TCTE3Q8IZS6 198 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 DMRTB1Q96MA1 342 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 ZNF75AQ96N20 296 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 FYTTD1Q96QD9 318 aaKnown RBP23.29■■□□□ 1.32
COL13A1-212ENST00000520133 PTTG3PQ9NZH4 202 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 DKK4Q9UBT3 224 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 MSRB2Q9Y3D2 182 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 FRYQ5TBA9 3013 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 LYZL6O75951 148 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 NGFP01138 241 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 MEF2DQ14814 521 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 VWA1Q6PCB0 445 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 BEX1Q9HBH7 125 aa23.29■■□□□ 1.32
COL13A1-212ENST00000520133 MOV10Q9HCE1 1003 aaKnown RBP23.29■■□□□ 1.32
COL13A1-212ENST00000520133 ZNF850A8MQ14 1090 aa23.28■■□□□ 1.32
COL13A1-212ENST00000520133 MECP2P51608 486 aaKnown RBP23.28■■□□□ 1.32
COL13A1-212ENST00000520133 MRPL49Q13405 166 aaKnown RBP23.28■■□□□ 1.32
COL13A1-212ENST00000520133 GABRA6Q16445 453 aa23.28■■□□□ 1.32
COL13A1-212ENST00000520133 ASCL4Q6XD76 172 aa23.28■■□□□ 1.32
COL13A1-212ENST00000520133 ARHGAP5-AS1Q96IT6 56 aa23.28■■□□□ 1.32
COL13A1-212ENST00000520133 PAPOLGQ9BWT3 736 aaKnown RBP23.28■■□□□ 1.32
COL13A1-212ENST00000520133 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP23.28■■□□□ 1.32
COL13A1-212ENST00000520133 PLSCR4Q9NRQ2 329 aa23.28■■□□□ 1.32
COL13A1-212ENST00000520133 WASF3Q9UPY6 502 aa23.28■■□□□ 1.32
COL13A1-212ENST00000520133 MBD3L4A6NDZ8 208 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 MBD3L3A6NE82 208 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 MBD3L5A6NJ08 208 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 J3QW42 95 aa23.27■■□□□ 1.32
COL13A1-212ENST00000520133 MFNGO00587 321 aa23.27■■□□□ 1.32
COL13A1-212ENST00000520133 SPRY1O43609 319 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 BLVRBP30043 206 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 MAB21L1Q13394 359 aa23.27■■□□□ 1.32
COL13A1-212ENST00000520133 ST3GAL2Q16842 350 aa23.27■■□□□ 1.32
COL13A1-212ENST00000520133 INO80CQ6PI98 192 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 C1orf162Q8NEQ5 155 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 MBD3L2Q8NHZ7 208 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 NPDC1Q9NQX5 325 aaPredicted RBP23.27■■□□□ 1.32
COL13A1-212ENST00000520133 SCP2D1Q9UJQ7 156 aa23.27■■□□□ 1.32
COL13A1-212ENST00000520133 POU2F3Q9UKI9 436 aa23.27■■□□□ 1.32
COL13A1-212ENST00000520133 HTR3BO95264 441 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 AMY2AP04746 511 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 COX5AP20674 150 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 HOXC12P31275 282 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 PTGER4P35408 488 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 WNT5AP41221 380 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 HLXQ14774 488 aaPredicted RBP23.26■■□□□ 1.31
COL13A1-212ENST00000520133 FCN2Q15485 313 aa23.26■■□□□ 1.31
COL13A1-212ENST00000520133 KRTCAP3Q53RY4 240 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms