RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SDHAF2Q9NX18 166 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 ENOPH1Q9UHY7 261 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 RFNGQ9Y644 331 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 AHDC1Q5TGY3 1603 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 ZNF608Q9ULD9 1512 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 TRAV8-6A0A0B4J262 113 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 FAM240AA0A1B0GVK7 77 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 C5orf63A6NC05 138 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 MGAT4DA6NG13 374 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 J3QT63 122 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 M0R1X1 148 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 PLIN3O60664 434 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 CST4P01036 141 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 NPPAP01160 153 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 HSPD1P10809 573 aaKnown RBP3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 PRSS3P35030 304 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 DSTNP60981 165 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 C5orf47Q569G3 176 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 TEX30Q5JUR7 227 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 ZFP1Q6P2D0 407 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 DEGS2Q6QHC5 323 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 CYB561A3Q8NBI2 242 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 SYNPRQ8TBG9 265 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 CIRBP-AS1Q8TBR5 109 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 NT5CQ8TCD5 201 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 SLC25A46Q96AG3 418 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 CCDC124Q96CT7 223 aaKnown RBP3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 CPB2Q96IY4 423 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 Q96MT0 163 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 LINC00167Q96N53 147 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 C18orf15Q96N68 181 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 RNF157Q96PX1 679 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 ALS2CR12Q96Q35 445 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 CIB1Q99828 191 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 PDCD1LG2Q9BQ51 273 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 GOLPH3Q9H4A6 298 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 WFDC1Q9HC57 220 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 RAB23Q9ULC3 237 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 WIF1Q9Y5W5 379 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 TNS2Q63HR2 1409 aa3.25□□□□□ -1.89
HMGB1P46-201ENST00000520062 IGKV2D-24A0A075B6R9 120 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 CCL15-CCL14A0A0B4J2E2 113 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 CENPVL3A0A0U1RRI6 287 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 MAGEB4O15481 346 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 CCNE2O96020 404 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 MRPL3P09001 348 aaKnown RBP3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 LINC00869P0C866 280 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 LIPCP11150 499 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 IL1RNP18510 177 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 PSMB5P28074 263 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 CD151P48509 253 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR12D2P58182 307 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 VSNL1P62760 191 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 EBI3Q14213 229 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 CCL15Q16663 113 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 ACTL10Q5JWF8 245 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 SYT6Q5T7P8 510 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 HHATQ5VTY9 493 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR4D6Q8NGJ1 314 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR9A2Q8NGT5 310 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 TMEM239Q8WW34 195 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 FRZBQ92765 325 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 NEURL3Q96EH8 262 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 L3HYPDHQ96EM0 354 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 COPS4Q9BT78 406 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 FRMD8P1Q9BZ68 369 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 TMEM100Q9NV29 134 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 CLEC2DQ9UHP7 191 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 LRRC42Q9Y546 428 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 NPHP4O75161 1426 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 PIK3R4Q99570 1358 aa3.24□□□□□ -1.89
HMGB1P46-201ENST00000520062 IGLV4-60A0A075B6I1 120 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 IGHV6-1A0A0B4J1U7 121 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 LINC00854A0A1B0GVQ3 168 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 CCDC22O60826 627 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 ZNF324O75467 553 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 IGLV2-8P01709 118 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 IGLV3-25P01717 112 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 RPN2P04844 631 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 CD9P21926 228 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 PAX6P26367 422 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 RANBP1P43487 201 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 PRLHRP49683 370 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 C2orf80Q0P641 193 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 LINC00483Q53H64 154 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 TTC32Q5I0X7 151 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 RESP18Q5W5W9 173 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 SSX6Q7RTT6 188 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 SYCE1Q8N0S2 351 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 ZNF645Q8N7E2 425 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 TMEM159Q96B96 161 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 ADTRPQ96IZ2 230 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 ATP6V1G3Q96LB4 118 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 CTRCQ99895 268 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 RNF5Q99942 180 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 NUDT9Q9BW91 350 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR52A5Q9H2C5 316 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 ACOT13Q9NPJ3 140 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 PPIL1Q9Y3C6 166 aa3.23□□□□□ -1.89
HMGB1P46-201ENST00000520062 NACAE9PAV3 2078 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms