RNA–Protein interactions for RNA: ENST00000519760.1

CDK1-208, Transcript of cyclin dependent kinase 1, human

TSL 3

Gene CDK1, Length 276 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK1-208	ENST00000519760	ZNF625	Q96I27	306 aa	Predicted RBP	0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	RDH12	Q96NR8	316 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	TXNDC17	Q9BRA2	123 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	TUBA4B	Q9H853	241 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	0.51	□□□□□ -2.33	2e-11	■■■■■ 57.6
CDK1-208	ENST00000519760	HEBP1	Q9NRV9	189 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	CLN6	Q9NWW5	311 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	MRPL16	Q9NX20	251 aa	Known RBP	0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	PTTG3P	Q9NZH4	202 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	PITPNC1	Q9UKF7	332 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	ZNF608	Q9ULD9	1512 aa	Predicted RBP	0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	DDX19B	Q9UMR2	479 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	ZNF257	Q9Y2Q1	563 aa		0.51	□□□□□ -2.33
CDK1-208	ENST00000519760	IGHV6-1	A0A0B4J1U7	121 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	ZNF729	A6NN14	1252 aa	Predicted RBP	0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	COIL	P38432	576 aa	Predicted RBP	0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	RFC3	P40938	356 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	GRB2	P62993	217 aa	Known RBP	0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	INCA1	Q0VD86	236 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	OR1Q1	Q15612	314 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	CASC1	Q6TDU7	716 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	CYHR1	Q6ZMK1	362 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	RGS9BP	Q6ZS82	235 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	TCF23	Q7RTU1	214 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	RNF10	Q8N5U6	811 aa	Known RBP	0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	FBXO32	Q969P5	355 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	RAD51AP1	Q96B01	352 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	SNF8	Q96H20	258 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	CRACR2A	Q9BSW2	395 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	TTTY12	Q9BZ98	90 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	SLC7A5P2	Q9GIP4	190 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	RCL1	Q9Y2P8	373 aa	Known RBP	0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	TRAPPC1	Q9Y5R8	145 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	DOCK10	Q96BY6	2186 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	SHANK3	Q9BYB0	1731 aa		0.5	□□□□□ -2.33
CDK1-208	ENST00000519760	SMCO3	A2RU48	225 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	CTAG2	O75638	210 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	CXorf1	O96002	111 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	IGKV1D-33	P01593	117 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	IGKV1-33	P01594	117 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	CLTA	P09496	248 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	MYL2	P10916	166 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	CXCR1	P25024	350 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	TEAD1	P28347	426 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	PRSS3	P35030	304 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	SLC1A2	P43004	574 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	UBE2M	P61081	183 aa	Known RBP	0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	PRB3	Q04118	309 aa	Predicted RBP	0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	ZNF33A	Q06730	810 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	TAF7	Q15545	349 aa	Predicted RBP	0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	ANKDD1A	Q495B1	522 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	XKR7	Q5GH72	579 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	TRMT10C	Q7L0Y3	403 aa	Known RBP	0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	RAB43	Q86YS6	212 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	CPNE9	Q8IYJ1	553 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	SFXN5	Q8TD22	340 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	LMX1A	Q8TE12	382 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	RXFP2	Q8WXD0	754 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	RAB1C	Q92928	201 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	FAM19A4	Q96LR4	140 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	ZYG11B	Q9C0D3	744 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	RDH14	Q9HBH5	336 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	TMEM100	Q9NV29	134 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	PPIL1	Q9Y3C6	166 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	COL4A2	P08572	1712 aa		0.49	□□□□□ -2.33
CDK1-208	ENST00000519760	MROH7	Q68CQ1	1323 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	TSPAN11	A1L157	253 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	IGKV2-29	A2NJV5	120 aa	Predicted RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ZNF860	A6NHJ4	632 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760		H7C0C1	242 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	SLC31A1	O15431	190 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ERI3	O43414	337 aa	Known RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	HUS1	O60921	280 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	CTNS	O60931	367 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ZNF22	P17026	224 aa	Predicted RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ATP5O	P48047	213 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	PRDX4	Q13162	271 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ENDOG	Q14249	297 aa	Known RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	MAPRE2	Q15555	327 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	SSX2	Q16385	188 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	HADH	Q16836	314 aa	Known RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	TRMT5	Q32P41	509 aa	Known RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	STEAP4	Q687X5	459 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	SPESP1	Q6UW49	350 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760		Q6ZRU5	148 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	FAM228A	Q86W67	206 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ZCCHC24	Q8N2G6	241 aa	Known RBP	0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	RPRML	Q8N4K4	120 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	ZDHHC22	Q8N966	263 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	PRRC1	Q96M27	445 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	UCK2	Q9BZX2	261 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	FANCE	Q9HB96	536 aa		0.48	□□□□□ -2.33
CDK1-208	ENST00000519760	NOTCH1	P46531	2555 aa		0.47	□□□□□ -2.33
CDK1-208	ENST00000519760	IGKV1D-43	A0A0B4J1Z2	117 aa		0.47	□□□□□ -2.33
CDK1-208	ENST00000519760	TRBV11-1	A0A0K0K1C0	115 aa		0.47	□□□□□ -2.33
CDK1-208	ENST00000519760	HEATR9	A2RTY3	570 aa		0.47	□□□□□ -2.33
CDK1-208	ENST00000519760		A8MWP4	228 aa		0.47	□□□□□ -2.33
CDK1-208	ENST00000519760	ISLR	O14498	428 aa		0.47	□□□□□ -2.33
CDK1-208	ENST00000519760	LSM1	O15116	133 aa	Known RBP	0.47	□□□□□ -2.33

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms