RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 CXorf40AQ8TE69 158 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.71□□□□□ -2.143e-6■■■■■ 50.8
PABPC1-209ENST00000519100 ITFG2Q969R8 447 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 ISG20Q96AZ6 181 aaKnown RBP1.71□□□□□ -2.14
PABPC1-209ENST00000519100 FAM3DQ96BQ1 224 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 LRRC39Q96DD0 335 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 ZNF578Q96N58 590 aaPredicted RBP1.71□□□□□ -2.14
PABPC1-209ENST00000519100 OR2A5Q96R48 311 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 P2RX4Q99571 388 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 SH3GL3Q99963 347 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 PKIBQ9C010 78 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 OR2AG1Q9H205 316 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 FBXO44Q9H4M3 255 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 TMEM185BQ9H7F4 350 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 GEMIN7Q9H840 131 aaKnown RBP1.71□□□□□ -2.14
PABPC1-209ENST00000519100 C12orf10Q9HB07 376 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 FGF20Q9NP95 211 aaPredicted RBP1.71□□□□□ -2.14
PABPC1-209ENST00000519100 ST3GAL6Q9Y274 331 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 ZNF835Q9Y2P0 537 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 RHBDD3Q9Y3P4 386 aa1.71□□□□□ -2.14
PABPC1-209ENST00000519100 POLEQ07864 2286 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 IGHV5-51A0A0C4DH38 117 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 LOC100506127A0A0U1RQW1 187 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 OR6C74A6NCV1 312 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 GABRR3A8MPY1 467 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 INS-IGF2F8WCM5 200 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 GOLGA8TH3BQL2 631 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 NDUFS8O00217 210 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ATP8B1O43520 1251 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 DPM1O60762 260 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 AIFM1O95831 613 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 BCHEP06276 602 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CRYGCP07315 174 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 IVLP07476 585 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 MRPL3P09001 348 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CLTAP09496 248 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RHOXF2BP0C7M4 288 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CALM1P0DP23 149 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CALM2P0DP24 149 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CALM3P0DP25 149 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 MCF2P10911 925 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 SRMP19623 302 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 LCN1P31025 176 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CRYBB2P43320 205 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CSNK1A1P48729 337 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RND2P52198 227 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 GTF2A1P52655 376 aaPredicted RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 YWHAGP61981 247 aaKnown RBP eCLIP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RPS15P62841 145 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 TWF1Q12792 350 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 XRCC4Q13426 336 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 IL18Q14116 193 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RCAN2Q14206 197 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 PRPSAP1Q14558 356 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CLINT1Q14677 625 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 MRPL23Q16540 153 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 Q3ZCU0 254 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 HSP90AA4PQ58FG1 418 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 XKR4Q5GH76 650 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 SPANXN2Q5MJ10 180 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 FAM71E1Q6IPT2 247 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ANKRD26P1Q6NSI1 321 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RNASEKQ6P5S7 137 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 DEGS2Q6QHC5 323 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 PLET1Q6UQ28 207 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 TEX43Q6ZNM6 134 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 H2AFVQ71UI9 128 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 BZW1Q7L1Q6 419 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ABHD13Q7L211 337 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 EIF3MQ7L2H7 374 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 HDDC2Q7Z4H3 204 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 OAFQ86UD1 273 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 KRT222Q8N1A0 295 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 LIX1Q8N485 282 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CSGALNACT2Q8N6G5 542 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 SPATA4Q8NEY3 305 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 B3GNT7Q8NFL0 401 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 OR5B3Q8NH48 314 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 OR8K3Q8NH51 312 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RHEBL1Q8TAI7 183 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ZNF502Q8TBZ5 544 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 PIBF1Q8WXW3 757 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 NEURL3Q96EH8 262 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ATP6V1G3Q96LB4 118 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 TSNARE1Q96NA8 513 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CHP1Q99653 195 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 FOXC2Q99958 501 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 KCTD14Q9BQ13 255 aaPredicted RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 RHOXF2Q9BQY4 288 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 LLPHQ9BRT6 129 aaKnown RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 NDFIP1Q9BT67 221 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 BBS2Q9BXC9 721 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 TEKT3Q9BXF9 490 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 OR51M1Q9H341 326 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ZNF430Q9H8G1 570 aaPredicted RBP1.7□□□□□ -2.14
PABPC1-209ENST00000519100 ZNF160Q9HCG1 818 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 NRBP2Q9NSY0 501 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 CHMP5Q9NZZ3 219 aa1.7□□□□□ -2.14
PABPC1-209ENST00000519100 LSM7Q9UK45 103 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms