RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ATAD2BQ9ULI0 1458 aa0.61□□□□□ -2.31
PCM1-208ENST00000518877 DOCK10Q96BY6 2186 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 MED13Q9UHV7 2174 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 ATG2BQ96BY7 2078 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 TENM3Q9P273 2699 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 GOLGA8OA6NCC3 632 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 GOLGA8NF8WBI6 632 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 FFAR1O14842 300 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 PSPHP1O15172 72 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 CCNB2O95067 398 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 TDP2O95551 362 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 P0DMU3 169 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 FAM231AP0DMU4 169 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 FAM231CP0DMU5 169 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 TROVE2P10155 538 aaKnown RBP eCLIP0.6□□□□□ -2.31
PCM1-208ENST00000518877 CXCR1P25024 350 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 PCK1P35558 622 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 RGS6P49758 472 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 GRB2P62993 217 aaKnown RBP0.6□□□□□ -2.31
PCM1-208ENST00000518877 INCA1Q0VD86 236 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 CEP55Q53EZ4 464 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 HHATQ5VTY9 493 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 STEAP4Q687X5 459 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 OR2T5Q6IEZ7 315 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 TMEM220Q6QAJ8 160 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 ZYG11AQ6WRX3 759 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 VKORC1L1Q8N0U8 176 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 OR2T29Q8NH02 315 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 FAM57AQ8TBR7 257 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 OR5P3Q8WZ94 311 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 ISG20Q96AZ6 181 aaKnown RBP0.6□□□□□ -2.31
PCM1-208ENST00000518877 YIPF6Q96EC8 236 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 UBE2E2Q96LR5 201 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 ZNF160Q9HCG1 818 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 STX18Q9P2W9 335 aaKnown RBP0.6□□□□□ -2.31
PCM1-208ENST00000518877 ZNF443Q9Y2A4 671 aaPredicted RBP0.6□□□□□ -2.31
PCM1-208ENST00000518877 CHTOPQ9Y3Y2 248 aaKnown RBP0.6□□□□□ -2.31
PCM1-208ENST00000518877 SSH2Q76I76 1423 aa0.6□□□□□ -2.31
PCM1-208ENST00000518877 RP1L1Q8IWN7 2480 aaPredicted RBP0.6□□□□□ -2.31
PCM1-208ENST00000518877 ZNF608Q9ULD9 1512 aaPredicted RBP0.59□□□□□ -2.31
PCM1-208ENST00000518877 GBF1Q92538 1859 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 SYNGR2O43760 224 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 PTMAP06454 111 aaKnown RBP0.59□□□□□ -2.31
PCM1-208ENST00000518877 STOMP27105 288 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 ATP5G2Q06055 141 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 C2orf54Q08AI8 447 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 LINC00303Q3SY05 128 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 PAGE2Q7Z2X7 111 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 NANOGNBQ7Z5D8 188 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 PRNTQ86SH4 94 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 RASD2Q96D21 266 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 SLC25A44Q96H78 314 aaPredicted RBP0.59□□□□□ -2.31
PCM1-208ENST00000518877 INIPQ9NRY2 104 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 TMEM106BQ9NUM4 274 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 ICOSQ9Y6W8 199 aa0.59□□□□□ -2.31
PCM1-208ENST00000518877 LAMB2P55268 1798 aa0.59□□□□□ -2.32
PCM1-208ENST00000518877 ADGRB3O60242 1522 aa0.59□□□□□ -2.32
PCM1-208ENST00000518877 NINLQ9Y2I6 1382 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 SETD1AO15047 1707 aaKnown RBP0.58□□□□□ -2.32
PCM1-208ENST00000518877 IGLL5B9A064 214 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 LINC01619G3V211 115 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 H0Y8G0 127 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 ISLRO14498 428 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 CPLX1O14810 134 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 BCKDKO14874 412 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 CDS2O95674 445 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 IGHV3-53P01767 116 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 TEAD1P28347 426 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 PRSS3P35030 304 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 COILP38432 576 aaPredicted RBP0.58□□□□□ -2.32
PCM1-208ENST00000518877 SLC1A2P43004 574 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 UQCRFS1P47985 274 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 SULT1E1P49888 294 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 ZNF83P51522 516 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 OR2B8PP59922 312 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 KRTAP10-4P60372 401 aaPredicted RBP0.58□□□□□ -2.32
PCM1-208ENST00000518877 ITIH4Q14624 930 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 CCDC183Q5T5S1 534 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 WDR82Q6UXN9 313 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 ITPRIPQ8IWB1 547 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 ZNF567Q8N184 647 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 LINC00337Q8N6G1 96 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 SFXN5Q8TD22 340 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 C8orf44Q96CB5 159 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 SCGB3A2Q96PL1 93 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 PKIBQ9C010 78 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 RDH14Q9HBH5 336 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 COX16Q9P0S2 106 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 VAX2Q9UIW0 290 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 NDRG2Q9UN36 371 aaKnown RBP0.58□□□□□ -2.32
PCM1-208ENST00000518877 SDK1Q7Z5N4 2213 aa0.58□□□□□ -2.32
PCM1-208ENST00000518877 INSRP06213 1382 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 A0A0B4J2C4 111 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 A0A0G2JMP0 313 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 A0A0X1KG70 313 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 ZNF729A6NN14 1252 aaPredicted RBP0.57□□□□□ -2.32
PCM1-208ENST00000518877 FCN3O75636 299 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 IFNW1P05000 195 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 CGB3P0DN86 165 aa0.57□□□□□ -2.32
PCM1-208ENST00000518877 CGB7P0DN87 165 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms