RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ANKHQ9HCJ1 492 aa-2.35□□□□□ -2.79
RNU6-542P-201ENST00000516405 NDRG2Q9UN36 371 aaKnown RBP-2.35□□□□□ -2.79
RNU6-542P-201ENST00000516405 RHBDD3Q9Y3P4 386 aa-2.35□□□□□ -2.79
RNU6-542P-201ENST00000516405 SNX8Q9Y5X2 465 aa-2.35□□□□□ -2.79
RNU6-542P-201ENST00000516405 NPTNQ9Y639 398 aa-2.35□□□□□ -2.79
RNU6-542P-201ENST00000516405 TEX15Q9BXT5 2789 aa-2.35□□□□□ -2.79
RNU6-542P-201ENST00000516405 DNHD1Q96M86 4753 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 C15orf38-AP3S2A0A0A6YYH1 394 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR2T8A6NH00 312 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 K7ERS5 55 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 ATP6V1G1O75348 118 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 FERP16591 822 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 SLC6A1P30531 599 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 RPS23P62266 143 aaKnown RBP-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 GBE1Q04446 702 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 TSPAN31Q12999 210 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 JAKMIP3Q5VZ66 844 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 C7orf65Q6ZTY9 151 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 KLHL7Q8IXQ5 586 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 DHRSXQ8N5I4 330 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 NPWQ8N729 165 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 Q8N814 137 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 CYB561A3Q8NBI2 242 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 KIF18AQ8NI77 898 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 ASB13Q8WXK3 278 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 BORCS5Q969J3 196 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 RERGQ96A58 199 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 PPM1MQ96MI6 270 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 RBM14Q96PK6 669 aaKnown RBP-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 KCNS3Q9BQ31 491 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 KIFC1Q9BW19 673 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 HSD3B7Q9H2F3 369 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 COPS7BQ9H9Q2 264 aaPredicted RBP-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 FAM153AQ9UHL3 310 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 RASD1Q9Y272 281 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 URGCP-MRPS24S4R325 110 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 PHRF1Q9P1Y6 1649 aaKnown RBP-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 C2CD3Q4AC94 2353 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 STRCQ7RTU9 1775 aa-2.36□□□□□ -2.79
RNU6-542P-201ENST00000516405 BCORL1Q5H9F3 1711 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 ELP1O95163 1332 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 SCN3AQ9NY46 2000 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 SCN10AQ9Y5Y9 1956 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 TMEM72A0PK05 275 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR5B21A6NL26 309 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 TRAPPC2LH3BP13 241 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 SH2D1AO60880 128 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 FGF4P08620 206 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 CCDC175P0C221 793 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 FOXN2P32314 431 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZNF80P51504 273 aaPredicted RBP-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 AP3M2P53677 418 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 MYBPC1Q00872 1141 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 LINC01620Q4KN68 170 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 FAM133AQ8N9E0 248 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR5AU1Q8NGC0 362 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR2T34Q8NGX1 318 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR2T3Q8NH03 318 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 FAM57AQ8TBR7 257 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 ISG20Q96AZ6 181 aaKnown RBP-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 Q96MT0 163 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 QKIQ96PU8 341 aaKnown RBP eCLIP-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 NACA2Q9H009 215 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 SIRPDQ9H106 197 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZWILCHQ9H900 591 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 LRRC40Q9H9A6 602 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 DCAF16Q9NXF7 216 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 KCNE3Q9Y6H6 103 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZNF780BQ9Y6R6 833 aa-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 RBBP6Q7Z6E9 1792 aaKnown RBP-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 PRKDCP78527 4128 aaKnown RBP-2.37□□□□□ -2.79
RNU6-542P-201ENST00000516405 CDHR2Q9BYE9 1310 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 A8MXE2 369 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZNF879B4DU55 563 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 CLDN25C9JDP6 229 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 F5H5P2 479 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 IGLV3-1P01715 115 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 FGF1P05230 155 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 H2BFMP0C1H6 154 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 NCF2P19878 526 aaPredicted RBP-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 IL3RAP26951 378 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 HTR2CP28335 458 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 HPCAL1P37235 193 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 RAB9AP51151 201 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 CNN1P51911 297 aaKnown RBP-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 ZNF117Q03924 483 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 ARHGAP19Q14CB8 494 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 HSP90AB3PQ58FF7 597 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 MPP7Q5T2T1 576 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 AADACL4Q5VUY2 407 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 FAM159AQ6UWV7 190 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 PRSS42Q7Z5A4 293 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 FAM19A1Q7Z5A9 133 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 PRR15Q8IV56 129 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 ARL10Q8N8L6 244 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 C12orf29Q8N999 325 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR7G3Q8NG95 312 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 OR4M2Q8NGB6 313 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 SGMS2Q8NHU3 365 aa-2.38□□□□□ -2.79
RNU6-542P-201ENST00000516405 BAALCQ8WXS3 180 aa-2.38□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms