RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 ANKRD61A6NGH8 418 aa12□□□□□ -0.49
NUP54-216ENST00000514901 ZNF732B4DXR9 585 aa12□□□□□ -0.49
NUP54-216ENST00000514901 E9PI62 339 aa12□□□□□ -0.49
NUP54-216ENST00000514901 PPIAL4DF5H284 164 aa12□□□□□ -0.49
NUP54-216ENST00000514901 OGG1O15527 345 aa12□□□□□ -0.49
NUP54-216ENST00000514901 CD5LO43866 347 aa12□□□□□ -0.49
NUP54-216ENST00000514901 ZFPL1O95159 310 aa12□□□□□ -0.49
NUP54-216ENST00000514901 LY6G6DO95868 133 aa12□□□□□ -0.49
NUP54-216ENST00000514901 CYB5R3P00387 301 aaPredicted RBP12□□□□□ -0.49
NUP54-216ENST00000514901 PPIAL4FP0DN26 164 aa12□□□□□ -0.49
NUP54-216ENST00000514901 THBS2P35442 1172 aa12□□□□□ -0.49
NUP54-216ENST00000514901 TAS2R43P59537 309 aa12□□□□□ -0.49
NUP54-216ENST00000514901 SLC35A2P78381 396 aa12□□□□□ -0.49
NUP54-216ENST00000514901 ZNF154Q13106 437 aa12□□□□□ -0.49
NUP54-216ENST00000514901 KCNJ8Q15842 424 aa12□□□□□ -0.49
NUP54-216ENST00000514901 CEP78Q5JTW2 689 aa12□□□□□ -0.49
NUP54-216ENST00000514901 RBM48Q5RL73 367 aaKnown RBP12□□□□□ -0.49
NUP54-216ENST00000514901 PLCXD3Q63HM9 321 aa12□□□□□ -0.49
NUP54-216ENST00000514901 C11orf53Q8IXP5 236 aa12□□□□□ -0.49
NUP54-216ENST00000514901 NANOGP1Q8N7R0 232 aa12□□□□□ -0.49
NUP54-216ENST00000514901 HPSE2Q8WWQ2 592 aa12□□□□□ -0.49
NUP54-216ENST00000514901 C1orf159Q96HA4 380 aa12□□□□□ -0.49
NUP54-216ENST00000514901 GAL3ST1Q99999 423 aa12□□□□□ -0.49
NUP54-216ENST00000514901 DUSP21Q9H596 190 aa12□□□□□ -0.49
NUP54-216ENST00000514901 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
NUP54-216ENST00000514901 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
NUP54-216ENST00000514901 SLC7A11Q9UPY5 501 aa12□□□□□ -0.49
NUP54-216ENST00000514901 PPIAL4AQ9Y536 164 aa12□□□□□ -0.49
NUP54-216ENST00000514901 hCG_1807616A0A1W2PRN6 198 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 WNT9BO14905 357 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 LHBP01229 141 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 IGHV4-31P0DP07 118 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 ZNF20P17024 532 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 CRHBPP24387 322 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 GPM6AP51674 278 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 GTF2A1P52655 376 aaPredicted RBP11.99□□□□□ -0.49
NUP54-216ENST00000514901 WNT4P56705 351 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 LMO4P61968 165 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 CDK5R1Q15078 307 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 ZMYND11Q15326 602 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 UTS2BQ765I0 119 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 WDR86Q86TI4 376 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 ZNF485Q8NCK3 441 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 OR13C3Q8NGS6 347 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 OR10Z1Q8NGY1 313 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 ZNF671Q8TAW3 534 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 RPS4Y2Q8TD47 263 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 SMR3AQ99954 134 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 MND1Q9BWT6 205 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 CHST5Q9GZS9 411 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 OR51I2Q9H344 312 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 NARFLQ9H6Q4 476 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 ZNF665Q9H7R5 613 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 TMEM165Q9HC07 324 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 NEK6Q9HC98 313 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 GPR173Q9NS66 373 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 PCDHB10Q9UN67 800 aa11.99□□□□□ -0.49
NUP54-216ENST00000514901 TRAV38-1A0A0B4J264 116 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 A6NIN4 97 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 B4DSR2 109 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 H3BSH0 61 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 LGALS8O00214 317 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 CDIPTO14735 213 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 RGS10O43665 173 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 NDUFA2O43678 99 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 IGHV2-5P01817 119 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 FUT6P51993 359 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 CNN3Q15417 329 aaKnown RBP11.98□□□□□ -0.49
NUP54-216ENST00000514901 LINC01356Q8N9X3 169 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 SCCPDHQ8NBX0 429 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 GPR148Q8TDV2 347 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 FGGYQ96C11 551 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 SMIM19Q96E16 107 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 PDCD1LG2Q9BQ51 273 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 YTHDF1Q9BYJ9 559 aaKnown RBP11.98□□□□□ -0.49
NUP54-216ENST00000514901 GSX1Q9H4S2 264 aaPredicted RBP11.98□□□□□ -0.49
NUP54-216ENST00000514901 ERVK-18Q9QC07 812 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 MIOXQ9UGB7 285 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 DHDHQ9UQ10 334 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 ZNF281Q9Y2X9 895 aa11.98□□□□□ -0.49
NUP54-216ENST00000514901 SONP18583 2426 aaKnown RBP11.97□□□□□ -0.49
NUP54-216ENST00000514901 WNK2Q9Y3S1 2297 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 MALRD1Q5VYJ5 2156 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 PQLC2LA1A4F0 135 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 ALX3O95076 343 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 CD1AP06126 327 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 PRKACBP22694 351 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 BDH1Q02338 343 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 ACSM1Q08AH1 577 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 UBE2V2Q15819 145 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 ZNF404Q494X3 552 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 DMKNQ6E0U4 476 aaPredicted RBP11.97□□□□□ -0.49
NUP54-216ENST00000514901 WDR82Q6UXN9 313 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 ZNF826PQ6ZT77 177 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 PRSS48Q7RTY5 328 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 SERPINA12Q8IW75 414 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 GCSAMQ8N6F7 178 aa11.97□□□□□ -0.49
NUP54-216ENST00000514901 DNAAF1Q8NEP3 725 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms