RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 DCST2Q5T1A1 773 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC22A10Q63ZE4 541 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 HEPN1Q6WQI6 88 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF546Q86UE3 836 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 CA13Q8N1Q1 262 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 GTPBP8Q8N3Z3 284 aaPredicted RBP6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SIRT6Q8N6T7 355 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 ARIH2OSQ8N7S6 290 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 OR13H1Q8NG92 308 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 CASTOR1Q8WTX7 329 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 HOXB13Q92826 284 aaPredicted RBP6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 IP6K3Q96PC2 410 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SOSTQ9BQB4 213 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 HINT3Q9NQE9 182 aaKnown RBP6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 MMP24Q9Y5R2 645 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 RFNGQ9Y644 331 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 NUP210LQ5VU65 1888 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SHISA3A0PJX4 238 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 OR2M5A3KFT3 312 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 CDHR4A6H8M9 788 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 TOMM40O96008 361 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 ARRB1P49407 418 aaPredicted RBP6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 OR10A3P58181 314 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 UBE2KP61086 200 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 YPEL5P62699 121 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 PJVKQ0ZLH3 352 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC17A1Q14916 467 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 RNASE12Q5GAN4 147 aaKnown RBP6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 Q6ZSR6 202 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 ZAR1Q86SH2 424 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 OAFQ86UD1 273 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 LAPTM4BQ86VI4 370 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SPICQ8N5J4 248 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 OR4S2Q8NH73 311 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 PFN4Q8NHR9 129 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 OR2V2Q96R30 315 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 TPPP3Q9BW30 176 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 ADGRL4Q9HBW9 690 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 GPR27Q9NS67 375 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 WNT16Q9UBV4 365 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC13A4Q9UKG4 626 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 TMED3Q9Y3Q3 217 aa6.65□□□□□ -1.35
PDLIM5-219ENST00000514743 COL5A1P20908 1838 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 ZC3H12DA2A288 527 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 EIF4E2O60573 245 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 PRAF2O60831 178 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 NDUFB8O95169 186 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 MT-CO2P00403 227 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 FGF9P31371 208 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 SULT1A1P50225 295 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 MMP15P51511 669 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 MRPS21P82921 87 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 EXOSC7Q15024 291 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 MRPL2Q5T653 305 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 IL34Q6ZMJ4 242 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 RNASEH2CQ8TDP1 164 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 KISS1RQ969F8 398 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 ANKRD9Q96BM1 317 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 DAZAP1Q96EP5 407 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 PHYHIPLQ96FC7 376 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 LPAR4Q99677 370 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 PIMREGQ9BSJ6 248 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 OR8D2Q9GZM6 311 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 MMP25Q9NPA2 562 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 TNFSF18Q9UNG2 199 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 FOXJ3Q9UPW0 622 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 KPTNQ9Y664 436 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 ATP23Q9Y6H3 246 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 URGCP-MRPS24S4R325 110 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 PCDH15Q96QU1 1955 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 CEP290O15078 2479 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 IRGMA1A4Y4 181 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 OR10J4P0C629 311 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 LIPCP11150 499 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 CELP19835 753 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 IGFBP4P22692 258 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 HTR1FP30939 366 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 GABRA5P31644 462 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 NPY4RP50391 375 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 OC90Q02509 493 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 TOMM5Q8N4H5 51 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 AKR1E2Q96JD6 320 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 LCORQ96JN0 433 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 FOXN4Q96NZ1 517 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 SYT3Q9BQG1 590 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 HCAR1Q9BXC0 346 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 RAB1BQ9H0U4 201 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF552Q9H707 407 aaPredicted RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 FAM60AQ9NP50 221 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 STARD5Q9NSY2 213 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 MRPL22Q9NWU5 206 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 CACFD1Q9UGQ2 172 aa6.64□□□□□ -1.35
PDLIM5-219ENST00000514743 HEATR5AQ86XA9 2040 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 A0A0J9YY10 115 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 GXYLT2A0PJZ3 443 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 SHISA8B8ZZ34 492 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 TGFBR3LH3BV60 316 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 OR7C2O60412 319 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 OR2C1O95371 312 aa6.63□□□□□ -1.35
PDLIM5-219ENST00000514743 DBIP07108 87 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms