RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 GLCCI1Q86VQ1 547 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LRRC28Q86X40 367 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-210ENST00000513957 COMMD2Q86X83 199 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 CATSPERDQ86XM0 798 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 ZDHHC23Q8IYP9 409 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 C8orf59Q8N0T1 100 aaPredicted RBP6.89□□□□□ -1.31
NEDD4-210ENST00000513957 RFLNBQ8N5W9 214 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 APH1BQ8WW43 257 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 CYGBQ8WWM9 190 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 UBE2FQ969M7 185 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LGALS12Q96DT0 336 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 LYZL4Q96KX0 146 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 HIST1H2AAQ96QV6 131 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 TLNRD1Q9H1K6 362 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 G6PC2Q9NQR9 355 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 GPR84Q9NQS5 396 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 RNF7Q9UBF6 113 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 ENPP5Q9UJA9 477 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 SLC22A13Q9Y226 551 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 N6AMT1Q9Y5N5 214 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 CACNG2Q9Y698 323 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 V9GYS6 101 aa6.89□□□□□ -1.31
NEDD4-210ENST00000513957 C2CD3Q4AC94 2353 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 TRAV38-1A0A0B4J264 116 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 A0A1B0GVI7 797 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ISPDA4D126 451 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 A8MXK9 166 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 F5H0A9 414 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 J3QLI3 93 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 CRLF1O75462 422 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 FOXH1O75593 365 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 PNPP00491 289 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 PIPP12273 146 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ANOS1P23352 680 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ACKR3P25106 362 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 HSPA13P48723 471 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 NPY4RP50391 375 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 GNG3P63215 75 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 CSNK2BP67870 215 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 MVKQ03426 396 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF85Q03923 595 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 MFGE8Q08431 387 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF154Q13106 437 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 PRDX4Q13162 271 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 SCGB2A2Q13296 93 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 RIPK1Q13546 671 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 CEACAM21Q3KPI0 293 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF404Q494X3 552 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 SPRNQ5BIV9 151 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 CLVS2Q5SYC1 327 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 AVPI1Q5T686 147 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 TMEM244Q5VVB8 128 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 TMEM42Q69YG0 159 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 DCDC5Q6ZRR9 648 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 MOGAT3Q86VF5 341 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 OR5A2Q8NGI9 324 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 OR10Z1Q8NGY1 313 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 OR51E1Q8TCB6 317 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 OR5P3Q8WZ94 311 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 RORBQ92753 470 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 TMEM186Q96B77 213 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 C12orf43Q96C57 262 aaKnown RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 TBX5Q99593 518 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 MDFIQ99750 246 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ALG8Q9BVK2 526 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 TTTY10Q9BZA0 68 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ZMAT4Q9H898 229 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 PLEKHA1Q9HB21 404 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 PATZ1Q9HBE1 687 aaKnown RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 FGF20Q9NP95 211 aaPredicted RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 ACOXLQ9NUZ1 547 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 CNOT2Q9NZN8 540 aaKnown RBP6.88□□□□□ -1.31
NEDD4-210ENST00000513957 MIOXQ9UGB7 285 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 RHBDD3Q9Y3P4 386 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 PPIAL4AQ9Y536 164 aa6.88□□□□□ -1.31
NEDD4-210ENST00000513957 A0A0G2JMP0 313 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 A0A0X1KG70 313 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 A6NLC8 198 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 TMEM212A6NML5 194 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 INAFM1C9JVW0 142 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 SYT7O43581 403 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 WBP4O75554 376 aaKnown RBP6.87□□□□□ -1.31
NEDD4-210ENST00000513957 GATBO75879 557 aaKnown RBP6.87□□□□□ -1.31
NEDD4-210ENST00000513957 RPP14O95059 124 aaKnown RBP6.87□□□□□ -1.31
NEDD4-210ENST00000513957 APOL3O95236 402 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 NRASP01111 189 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 TGFAP01135 160 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 LHBP01229 141 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 HTR1AP08908 422 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 CCDC159P0C7I6 412 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 MUC1P15941 1255 aaPredicted RBP6.87□□□□□ -1.31
NEDD4-210ENST00000513957 MYL12AP19105 171 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 IL2RGP31785 369 aa6.87□□□□□ -1.31
NEDD4-210ENST00000513957 THBS2P35442 1172 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms