RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SRSF10O75494 262 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 GLSO94925 669 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 C6orf47O95873 294 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 EPPINO95925 133 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ACTL6AO96019 429 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CLPSP04118 112 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 SERPINE1P05121 402 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 HPNP05981 417 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 FGF4P08620 206 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 NPIPA8P0DM63 369 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ME2P23368 584 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 S100A3P33764 101 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CDK9P50750 372 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 DIO3P55073 304 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CTBP2P56545 445 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 DSCR4P56555 118 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 MAGOHP61326 146 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 MRPS11P82912 194 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 UTF1Q5T230 341 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CCNJQ5T5M9 372 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ATAD3BQ5T9A4 648 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 OR4F3Q6IEY1 312 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CGB2Q6NT52 195 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 PAMR1Q6UXH9 720 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 C6orf120Q7Z4R8 191 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CLEC4FQ8N1N0 589 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 DHRSXQ8N5I4 330 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 KRTCAP2Q8N6L1 136 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CDRT4Q8N9R6 151 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 OR4A15Q8NGL6 344 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ZNF563Q8TA94 476 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 LINC01560Q8TB33 94 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 TRMT10AQ8TBZ6 339 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 ZNF675Q8TD23 568 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ADAMTS16Q8TE57 1224 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 PHF10Q8WUB8 498 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 SPRYD4Q8WW59 207 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 OR5P2Q8WZ92 322 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CDS1Q92903 461 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 HGDQ93099 445 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 SECISBP2Q96T21 854 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 ALG12Q9BV10 488 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ZNF385DQ9H6B1 395 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ZDHHC11Q9H8X9 412 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CACYBPQ9HB71 228 aaKnown RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 PROK2Q9HC23 129 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 FANCFQ9NPI8 374 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 PAK1IP1Q9NWT1 392 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 QPCTLQ9NXS2 382 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 C6orf203Q9P0P8 240 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 GNG12Q9UBI6 72 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 MARCOQ9UEW3 520 aaPredicted RBP3.13□□□□□ -1.91
HTT-210ENST00000512909 LGALS13Q9UHV8 139 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ZNF639Q9UID6 485 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 RPH3ALQ9UNE2 315 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 C15orf41Q9Y2V0 281 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 TMED5Q9Y3A6 229 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 ZNF337Q9Y3M9 751 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 MAB21L2Q9Y586 359 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 CCDC88CQ9P219 2028 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 FAM208BQ5VWN6 2430 aa3.13□□□□□ -1.91
HTT-210ENST00000512909 A0A1B0GWJ7 208 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TMEM120BA0PK00 339 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TUBAL3A6NHL2 446 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TRPC5OSA6NMA1 111 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 C17orf51A8MQB3 221 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 C9JVG2 144 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 H3BMQ9 156 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SCAMP2O15127 329 aaKnown RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 TBX19O60806 448 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 KCNK2O95069 426 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 HMGN2P05204 90 aaKnown RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 OR12D1P0DN82 309 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 PRG2P13727 222 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 PRPS1L1P21108 318 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 EVI2BP34910 448 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OPRM1P35372 400 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SERPINB5P36952 375 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CLDN8P56748 225 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CARD18P57730 90 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 EMX2Q04743 252 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CHRNB3Q05901 458 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 RIPPLY1Q0D2K3 151 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 ST3GAL3Q11203 375 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SNTB2Q13425 540 aaKnown RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 SLC25A35Q3KQZ1 300 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TMEM176BQ3YBM2 270 aaPredicted RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 LRRC23Q53EV4 343 aaPredicted RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 ANXA8L1Q5VT79 327 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 LIPNQ5VXI9 398 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 HBMQ6B0K9 141 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TMEM225Q6GV28 225 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TNFAIP8L2Q6P589 184 aaPredicted RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 NPSR1Q6W5P4 371 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 STAC2Q6ZMT1 411 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OLIG3Q7RTU3 272 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 HSD17B13Q7Z5P4 300 aaPredicted RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 HMGN2P46Q86SG4 172 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CLECL1Q8IZS7 167 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms