RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NIPAL2Q9H841 368 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 RAB18Q9NP72 206 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 DNAJB9Q9UBS3 223 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 DNAJB11Q9UBS4 358 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 KLHDC2Q9Y2U9 406 aa10.31□□□□□ -0.76
VEGFA-216ENST00000512683 TRBV23-1A0A0A0MS06 115 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ANKRD61A6NGH8 418 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 NKX6-3A6NJ46 265 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ACOD1A6NK06 481 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 PRR23D1E9PI22 279 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-216ENST00000512683 CDIPTO14735 213 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 PRODHO43272 600 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 TBX1O43435 398 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 E2F6O75461 281 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 DNAJC8O75937 253 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-216ENST00000512683 HMGN1P05114 100 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 CSF1P09603 554 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 PRR23D2P0DMB1 279 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ANXA8P13928 327 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 PAICSP22234 425 aaKnown RBP10.3□□□□□ -0.76
VEGFA-216ENST00000512683 SLC2A5P22732 501 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 POU4F2Q12837 409 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 HERPUD1Q15011 391 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 TMEM236Q5W0B7 351 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF788Q6ZQV5 615 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 Q6ZTK2 550 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 FAM57BQ71RH2 274 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.3□□□□□ -0.76
VEGFA-216ENST00000512683 CPOQ8IVL8 374 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 Q8N7P7 452 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 BBS1Q8NFJ9 593 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 OTOSQ8NHW6 89 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 HIST1H2AAQ96QV6 131 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 CADM1Q9BY67 442 aaKnown RBP10.3□□□□□ -0.76
VEGFA-216ENST00000512683 MEGF9Q9H1U4 602 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF556Q9HAH1 456 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 DNAJC27Q9NZQ0 273 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 RHBDD3Q9Y3P4 386 aa10.3□□□□□ -0.76
VEGFA-216ENST00000512683 IGHV3OR15-7A0A075B7D8 119 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 A0A1W2PPH5 198 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 SIGLEC5O15389 551 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 GSC2O15499 205 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 ACAA1P09110 424 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-216ENST00000512683 ATP6V1B1P15313 513 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 AMY2BP19961 511 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 GABRA5P31644 462 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 SLC35E4Q6ICL7 350 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 LIAT1Q6ZQX7 453 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 REC114Q7Z4M0 266 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 ANGPTL6Q8NI99 470 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 ZNF671Q8TAW3 534 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 THEM6Q8WUY1 208 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 OR5P3Q8WZ94 311 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 UTP4Q969X6 686 aaKnown RBP10.29□□□□□ -0.76
VEGFA-216ENST00000512683 PAPOLGQ9BWT3 736 aaKnown RBP10.29□□□□□ -0.76
VEGFA-216ENST00000512683 CDCA4Q9BXL8 241 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 RANBP3Q9H6Z4 567 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-216ENST00000512683 SLC25A19Q9HC21 320 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 BRD7Q9NPI1 651 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 SIRT7Q9NRC8 400 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 RASL12Q9NYN1 266 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 SLC25A10Q9UBX3 287 aaPredicted RBP10.29□□□□□ -0.76
VEGFA-216ENST00000512683 LRP12Q9Y561 859 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 MAB21L2Q9Y586 359 aa10.29□□□□□ -0.76
VEGFA-216ENST00000512683 MEIOCA2RUB1 952 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 OPN1MWP04001 364 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 LYNP07948 512 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 H2BFMP0C1H6 154 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 OPN1MW2P0DN77 364 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 OPN1MW3P0DN78 364 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 ALOX5APP20292 161 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 SAA4P35542 130 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 DAPP51397 102 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 HCCSP53701 268 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 BNIP1Q12981 228 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 IKZF1Q13422 519 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 SLC35D3Q5M8T2 416 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 KPRPQ5T749 579 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-216ENST00000512683 FAHD1Q6P587 224 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 DEGS2Q6QHC5 323 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 PDZD9Q8IXQ8 264 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 FAM216BQ8N7L0 139 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 FAM110DQ8TAY7 271 aaPredicted RBP10.28□□□□□ -0.76
VEGFA-216ENST00000512683 NRBF2Q96F24 287 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 PGAM5Q96HS1 289 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 RNF170Q96K19 258 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 LYZL4Q96KX0 146 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 YY1AP1Q9H869 796 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 HEXA-AS1Q9H8Q6 139 aa10.28□□□□□ -0.76
VEGFA-216ENST00000512683 hCG_1809904A0A1W2PP81 198 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PPE2 198 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PR64 198 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PRV1 198 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 ACKR3P25106 362 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 CRISP1P54107 249 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 CSNK2BP67870 215 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 EGR3Q06889 387 aa10.27□□□□□ -0.77
VEGFA-216ENST00000512683 APOFQ13790 326 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms