RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RNF170Q96K19 258 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 ZFP3Q96NJ6 502 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 NAPGQ99747 312 aaPredicted RBP1.73□□□□□ -2.13
CHD1-207ENST00000511628 SULT4A1Q9BR01 284 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 ZNF2Q9BSG1 426 aaPredicted RBP1.73□□□□□ -2.13
CHD1-207ENST00000511628 EMC6Q9BV81 110 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 PORCNQ9H237 461 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 IFNKQ9P0W0 207 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 FLVCR2Q9UPI3 526 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 TMEM131Q92545 1883 aa1.73□□□□□ -2.13
CHD1-207ENST00000511628 IGHV6-1A0A0B4J1U7 121 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 IGHV2OR16-5A0A0B4J2B6 119 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 IGKV1-6A0A0C4DH72 117 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 J3QT63 122 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 RFXANKO14593 260 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 RRP8O43159 456 aaKnown RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 RCBTB2O95199 551 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 CYB5R3P00387 301 aaPredicted RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 IGKV1-39P01597 117 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 IGKV1D-39P04432 117 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 CD28P10747 220 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 IL1RNP18510 177 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 CD9P21926 228 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 IL3RAP26951 378 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 PSMC5P62195 406 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 RPL31P62899 125 aaKnown RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 PIGHQ14442 188 aaPredicted RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 KRTAP13-2Q52LG2 175 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 LUZP6Q538Z0 58 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 DUPD1Q68J44 220 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 APOBEC3HQ6NTF7 200 aaKnown RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 IGFL1Q6UW32 110 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 SLC7A5P1Q8MH63 180 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 STK40Q8N2I9 435 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 PDCL2Q8N4E4 241 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 SLC35G3Q8N808 338 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 TMEM105Q8N8V8 129 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 OR13C9Q8NGT0 318 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 NDNFQ8TB73 568 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 FAM131CQ96AQ9 280 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 SMARCD1Q96GM5 515 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 Q96MT0 163 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 ALS2CR12Q96Q35 445 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 MARVELD1Q9BSK0 173 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 CHCHD7Q9BUK0 85 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 SFXN3Q9BWM7 321 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 TM6SF2Q9BZW4 377 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 ING2Q9H160 280 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 ZSCAN16Q9H4T2 348 aaPredicted RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 DDIT4Q9NX09 232 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 TAS2R5Q9NYW4 299 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 ENOPH1Q9UHY7 261 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 BZW2Q9Y6E2 419 aaKnown RBP1.72□□□□□ -2.13
CHD1-207ENST00000511628 AK9Q5TCS8 1911 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 LOXHD1Q8IVV2 1947 aa1.72□□□□□ -2.13
CHD1-207ENST00000511628 SYNRGQ9UMZ2 1314 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 IGLV3-12A0A075B6K2 115 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 TRAV8-6A0A0B4J262 113 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 TRAV40A0A0B4J280 105 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 IGHV1-3A0A0C4DH29 117 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 BTNL10A8MVZ5 291 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 UPK1BO75841 260 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 CDRT1O95170 752 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 RPN2P04844 631 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 IL4P05112 153 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 CD5P06127 495 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 SLC35G6P0C7Q6 338 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 HSPD1P10809 573 aaKnown RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 LIPCP11150 499 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 ZNF14P17017 642 aaPredicted RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 HOXB8P17481 243 aaPredicted RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 CELP19835 753 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 HTR2CP28335 458 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 MTPNP58546 118 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 ST3GAL4Q11206 333 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 DYNC1I2Q13409 638 aaKnown RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 TAL2Q16559 108 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 FAM27D1Q5T7N8 215 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 FAM222AQ5U5X8 452 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 SLC25A34Q6PIV7 304 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 ERO1BQ86YB8 467 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 FAM58AQ8N1B3 248 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 LINC00337Q8N6G1 96 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 ST20-AS1Q8NBB2 130 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 OR6K6Q8NGW6 343 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 RTN4IP1Q8WWV3 396 aaPredicted RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 DEDD2Q8WXF8 326 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 ING5Q8WYH8 240 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 WDR34Q96EX3 536 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 LINC00477Q96M19 166 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 UTP23Q9BRU9 249 aaKnown RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 DHX35Q9H5Z1 703 aaKnown RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 LINC00574Q9H8X3 128 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 SND1-IT1Q9HBX3 110 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 ANKHQ9HCJ1 492 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 STMN3Q9NZ72 180 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 MARCOQ9UEW3 520 aaPredicted RBP1.71□□□□□ -2.14
CHD1-207ENST00000511628 V9GYY9 64 aa1.71□□□□□ -2.14
CHD1-207ENST00000511628 SCN4AP35499 1836 aa1.7□□□□□ -2.14
CHD1-207ENST00000511628 IGLV2-18A0A075B6J9 118 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms