RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 EVX1P49640 407 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 KHKP50053 298 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 XKP51811 444 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 CRISP3P54108 245 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 RAB14P61106 215 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 HOXC5Q00444 222 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 CDK6Q00534 326 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 HSF2Q03933 536 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 ACSM1Q08AH1 577 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 RAB40BQ12829 278 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 COX10Q12887 443 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 PDE7AQ13946 482 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 FGFBP1Q14512 234 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 FAM205BPQ63HN1 556 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 GPR139Q6DWJ6 353 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 CNIH2Q6PI25 160 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 FIP1L1Q6UN15 594 aaKnown RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 TEX261Q6UWH6 196 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 TMEM107Q6UX40 140 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 IKBIPQ70UQ0 350 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 GALNT10Q86SR1 603 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 CLECL1Q8IZS7 167 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 GABRG1Q8N1C3 465 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 Q8N402 240 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 ATP6V1C2Q8NEY4 427 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 OR4M2Q8NGB6 313 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 OR8H1Q8NGG4 311 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 OR6K3Q8NGY3 331 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 VANGL1Q8TAA9 524 aaPredicted RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 FNDC9Q8TBE3 224 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 WDR20Q8TBZ3 569 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 ZNF431Q8TF32 576 aaPredicted RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 UPRTQ96BW1 309 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 TM4SF19Q96DZ7 209 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 MTERF3Q96E29 417 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 KLHL15Q96M94 604 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 DGAT2Q96PD7 388 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 DUX3Q96PT4 197 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 OR2M2Q96R28 347 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 COPS8Q99627 209 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 ASCL2Q99929 193 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 C7orf50Q9BRJ6 194 aaKnown RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 KATNB1Q9BVA0 655 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 TSSK6Q9BXA6 273 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 MED28Q9H204 178 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 PPA2Q9H2U2 334 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 REEP4Q9H6H4 257 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 MRPS30Q9NP92 439 aaKnown RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 SCRT2Q9NQ03 307 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 MED9Q9NWA0 146 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 LYARQ9NX58 379 aaKnown RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 IL20Q9NYY1 176 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 MAT2BQ9NZL9 334 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 COPZ2Q9P299 210 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 RABL2AQ9UBK7 228 aaPredicted RBP4.41□□□□□ -1.7
GYPB-212ENST00000511198 VPS29Q9UBQ0 182 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 UBQLN2Q9UHD9 624 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 GLS2Q9UI32 602 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 KIF25Q9UIL4 384 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 CLEC4AQ9UMR7 237 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 RABL2BQ9UNT1 228 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 NUBP2Q9Y5Y2 271 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 CDH10Q9Y6N8 788 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 U3KQ87 197 aa4.41□□□□□ -1.7
GYPB-212ENST00000511198 PKD1P98161 4303 aa4.4□□□□□ -1.7
GYPB-212ENST00000511198 LINC00854A0A1B0GVQ3 168 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 TRBC2A0A5B9 178 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 I3L521 148 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 J3QLI3 93 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 TRAF3IP2O43734 574 aaPredicted RBP4.4□□□□□ -1.71
GYPB-212ENST00000511198 CHP2O43745 196 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 GALR3O60755 368 aaPredicted RBP4.4□□□□□ -1.71
GYPB-212ENST00000511198 AQP8O94778 261 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 AP2A2O94973 939 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 HLA-DPB1P04440 258 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 CRYBA1P05813 215 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 H1F0P07305 194 aaKnown RBP4.4□□□□□ -1.71
GYPB-212ENST00000511198 RRASP10301 218 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 ACP2P11117 423 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 LAMP1P11279 417 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 GSTM3P21266 225 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 ZP3P21754 424 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 AQP1P29972 269 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 SLC6A1P30531 599 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 CRATP43155 626 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 GBX2P52951 348 aaPredicted RBP4.4□□□□□ -1.71
GYPB-212ENST00000511198 SUCLG1P53597 346 aaKnown RBP4.4□□□□□ -1.71
GYPB-212ENST00000511198 BDH1Q02338 343 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 IRF8Q02556 426 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 ZNF763Q0D2J5 394 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 CHIT1Q13231 466 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 NAE1Q13564 534 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 IL18Q14116 193 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 GRK1Q15835 563 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 AANATQ16613 207 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 LIPKQ5VXJ0 399 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 GGNBP1Q5YKI7 109 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 C22orf42Q6IC83 251 aa4.4□□□□□ -1.71
GYPB-212ENST00000511198 BAIAP2L2Q6UXY1 529 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms