RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 COX7A1P24310 79 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 FASP25445 335 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 NPY1RP25929 384 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 CFHR2P36980 270 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 GATA4P43694 442 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 RBP2P50120 134 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 WDR4P57081 412 aaKnown RBP2.4□□□□□ -2.02
CLOCK-209ENST00000511124 SEC61A1P61619 476 aaKnown RBP2.4□□□□□ -2.02
CLOCK-209ENST00000511124 H3F3AP84243 136 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 LIPEQ05469 1076 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 MFGE8Q08431 387 aaPredicted RBP2.4□□□□□ -2.02
CLOCK-209ENST00000511124 KRTAP24-1Q3LI83 254 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 VMA21Q3ZAQ7 101 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 TEX38Q6PEX7 206 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 SLC25A47Q6Q0C1 308 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 C9orf139Q6ZV77 190 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 FAM57BQ71RH2 274 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF771Q7L3S4 317 aaPredicted RBP2.4□□□□□ -2.02
CLOCK-209ENST00000511124 LINC00596Q86U02 117 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 SKA3Q8IX90 412 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 FAM156AQ8NDB6 213 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 TSPAN14Q8NG11 270 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 GGHQ92820 318 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 CORO2AQ92828 525 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 DUS3LQ96G46 650 aaKnown RBP2.4□□□□□ -2.02
CLOCK-209ENST00000511124 GRAMD2BQ96HH9 432 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 REEP6Q96HR9 211 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 NRTNQ99748 197 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 SSX3Q99909 188 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 ENY2Q9NPA8 101 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 INPP5EQ9NRR6 644 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 PNPOQ9NVS9 261 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 NPAP1Q9NZP6 1156 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 MOB4Q9Y3A3 225 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 SESN1Q9Y6P5 492 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 HSPE1-MOB4S4R3N1 261 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 CHD3Q12873 2000 aaKnown RBP2.4□□□□□ -2.02
CLOCK-209ENST00000511124 HECTD1Q9ULT8 2610 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 CFAP54Q96N23 3096 aa2.4□□□□□ -2.02
CLOCK-209ENST00000511124 TMEM269A0A1B0GVZ9 245 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF729A6NN14 1252 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 B4DXG7 233 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 PDCD5O14737 125 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SASH3O75995 380 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CLPXO76031 633 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CNIH1O95406 144 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 OPN1SWP03999 348 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ELANEP08246 267 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF728P0DKX0 622 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SOX6P35712 828 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CAPGP40121 348 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CX3CR1P49238 355 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 GABPB1Q06547 395 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SPCS2Q15005 226 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 RTL8BQ17RB0 113 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 PNLIPRP3Q17RR3 467 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 Q3ZCU0 254 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 LCN8Q6JVE9 175 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF774Q6NX45 483 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 MZT2AQ6P582 158 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 COLCA1Q6ZS62 124 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 BTN2A1Q7KYR7 527 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 MOB3BQ86TA1 216 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 LDLRAD3Q86YD5 345 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 OR1L6Q8NGR2 347 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 OR9G1Q8NH87 305 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 PYURFQ96I23 114 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CLUHP3Q96NS8 147 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 WNT5BQ9H1J7 359 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 BRD7Q9NPI1 651 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 DIABLOQ9NR28 239 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 WARS2Q9UGM6 360 aaKnown RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 DAPK2Q9UIK4 370 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 FZR1Q9UM11 496 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 COA3Q9Y2R0 106 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 POLR3KQ9Y2Y1 108 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 UBE2J1Q9Y385 318 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CEP350Q5VT06 3117 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM30CPA0ZSE6 113 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 METTL21EPA6NDL7 271 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 FAM181BA6NEQ2 426 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 NCBP2LA6PVI3 153 aaKnown RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 EREGO14944 169 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 TP73O15350 636 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 GYG2O15488 501 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 PSPNO60542 156 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 NOL3O60936 208 aaKnown RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 TPPPO94811 219 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 BAG2O95816 211 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 IGHV2-70P01814 119 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 IGFBP1P08833 259 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 RNF224P0DH78 156 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 T-ENOLP0DO92 83 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM11P17152 192 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 EPHA2P29317 976 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 DCTDP32321 178 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CRISP1P54107 249 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ISL1P61371 349 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ERVK-16P61578 105 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CSNK2BP67870 215 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms