RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	RNASE1	P07998	156 aa	Known RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	ACTR3	P61158	418 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	GNG3	P63215	75 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	ELF3	P78545	371 aa	Predicted RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	EGR3	Q06889	387 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	RIPPLY1	Q0D2K3	151 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	TMED1	Q13445	227 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZNF684	Q5T5D7	378 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	TMEM42	Q69YG0	159 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	STUM	Q69YW2	141 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	GID4	Q8IVV7	300 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	SLC35F2	Q8IXU6	374 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	ZDHHC23	Q8IYP9	409 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	ELMOD2	Q8IZ81	293 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	OR51E1	Q8TCB6	317 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	RPL3L	Q92901	407 aa	Known RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	SEH1L	Q96EE3	360 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	IL4I1	Q96RQ9	567 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	TBX15	Q96SF7	602 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	CCL13	Q99616	98 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	APOL4	Q9BPW4	351 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	GPR84	Q9NQS5	396 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	WARS2	Q9UGM6	360 aa	Known RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	MRM2	Q9UI43	246 aa	Known RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	OAZ3	Q9UMX2	235 aa		10.03	□□□□□ -0.8
CLDND1-223	ENST00000511081	TRAV40	A0A0B4J280	105 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081		A0A1B0GW55	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	SFTPB	P07988	381 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L2	P0CJ85	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L3	P0CJ86	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L4	P0CJ87	422 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L5	P0CJ88	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L6	P0CJ89	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L7	P0CJ90	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	HTR1F	P30939	366 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	CXCR4	P61073	352 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	ACTG1	P63261	375 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	BAMBI	Q13145	260 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	PDCD1	Q15116	288 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	SLC9A3R2	Q15599	337 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4L9	Q6RFH8	374 aa	Predicted RBP	10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	SLC36A1	Q7Z2H8	476 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR8J1	Q8NGP2	316 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	ANGPTL6	Q8NI99	470 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	C8orf46	Q8TAG6	207 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	TRUB1	Q8WWH5	349 aa	Known RBP	10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	HIST1H2AA	Q96QV6	131 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	WDR13	Q9H1Z4	485 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	CNTD2	Q9H8S5	307 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	DUX4	Q9UBX2	424 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	KPTN	Q9Y664	436 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081		R4GMQ9	66 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081		V9GYS6	101 aa		10.02	□□□□□ -0.81
CLDND1-223	ENST00000511081	MGAM2	Q2M2H8	2515 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	IGHV3OR16-10	A0A075B7F0	116 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR5B21	A6NL26	309 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	DHRS7C	A6NNS2	312 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	ZNF732	B4DXR9	585 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	ZNF670-ZNF695	F2Z2N8	137 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081		H3BNX3	289 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	MAGEB4	O15481	346 aa	Predicted RBP	10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	MTRF1	O75570	445 aa	Known RBP	10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	DHRS3	O75911	302 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	TOX4	O94842	621 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	ALPL	P05186	524 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	ACAA1	P09110	424 aa	Predicted RBP	10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR2T7	P0C7T2	308 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	CCL1	P22362	96 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	GPM6A	P51674	278 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	ARF6	P62330	175 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	MFGE8	Q08431	387 aa	Predicted RBP	10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	FOXL1	Q12952	345 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	DEFB112	Q30KQ8	113 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	AWAT1	Q58HT5	328 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	SLC25A30	Q5SVS4	291 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	GPR157	Q5UAW9	335 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	METAP1D	Q6UB28	335 aa	Predicted RBP	10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	BRD3OS	Q6XYD6	125 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081		Q6YL49	198 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	C1orf122	Q6ZSJ8	110 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	FGFRL1	Q8N441	504 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR5T2	Q8NGG2	359 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR14K1	Q8NGZ2	314 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR2T27	Q8NH04	317 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	AQP3	Q92482	292 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	EME1	Q96AY2	570 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	MED30	Q96HR3	178 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	RBM4B	Q9BQ04	359 aa	Known RBP	10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	SEMA6A	Q9H2E6	1030 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	MOB1A	Q9H8S9	216 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	NOX4	Q9NPH5	578 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	OR52A1	Q9UKL2	312 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	IKZF2	Q9UKS7	526 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	SNX5	Q9Y5X3	404 aa		10.01	□□□□□ -0.81
CLDND1-223	ENST00000511081	LOC110117498-PIK3R3	F6TDL0	507 aa		10	□□□□□ -0.81
CLDND1-223	ENST00000511081	DLGAP1	O14490	977 aa		10	□□□□□ -0.81

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