RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ARF6P62330 175 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 PRDX4Q13162 271 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 SLC35D3Q5M8T2 416 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.38□□□□□ -0.27
LMNA-222ENST00000508500 FAM216BQ8N7L0 139 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 ZNF454Q8N9F8 522 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 LY6G5BQ8NDX9 201 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 CSNK2A3Q8NEV1 391 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 OR5T2Q8NGG2 359 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 OR5P3Q8WZ94 311 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 RPL3LQ92901 407 aaKnown RBP13.38□□□□□ -0.27
LMNA-222ENST00000508500 GABARAPL3Q9BY60 117 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 WDR13Q9H1Z4 485 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 RGCCQ9H4X1 137 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 PAPOLBQ9NRJ5 636 aaKnown RBP13.38□□□□□ -0.27
LMNA-222ENST00000508500 RPUSD1Q9UJJ7 312 aaKnown RBP13.38□□□□□ -0.27
LMNA-222ENST00000508500 TGP01266 2768 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 WNK1Q9H4A3 2382 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 PSMD9O00233 223 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 CST4P01036 141 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 MELTFP08582 738 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 SELLP14151 372 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 MUC1P15941 1255 aaPredicted RBP13.37□□□□□ -0.27
LMNA-222ENST00000508500 DCTDP32321 178 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 TGM4P49221 684 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 BPIFB3P59826 476 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
LMNA-222ENST00000508500 ESRRGP62508 458 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 APOFQ13790 326 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 FAM76BQ5HYJ3 339 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 STUMQ69YW2 141 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 SHISA2Q6UWI4 295 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 KRT74Q7RTS7 529 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 PNLDC1Q8NA58 520 aaKnown RBP13.37□□□□□ -0.27
LMNA-222ENST00000508500 SETD9Q8NE22 299 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 ST8SIA4Q92187 359 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 PIGCQ92535 297 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 ZNF696Q9H7X3 374 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 TNFRSF19Q9NS68 423 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 FAM118AQ9NWS6 357 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 COPS3Q9UNS2 423 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 MPC1Q9Y5U8 109 aa13.37□□□□□ -0.27
LMNA-222ENST00000508500 FAM181BA6NEQ2 426 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 E9PQ18 207 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 IGLV3-1P01715 115 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 MRPL3P09001 348 aaKnown RBP13.36□□□□□ -0.27
LMNA-222ENST00000508500 GNALP38405 381 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 CRISP1P54107 249 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 RPS7P62081 194 aaKnown RBP13.36□□□□□ -0.27
LMNA-222ENST00000508500 RELBQ01201 579 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 MICBQ29980 383 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 DMRTC1Q5HYR2 192 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 ATPAF1Q5TC12 328 aaPredicted RBP13.36□□□□□ -0.27
LMNA-222ENST00000508500 BCDIN3DQ7Z5W3 292 aaKnown RBP13.36□□□□□ -0.27
LMNA-222ENST00000508500 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 SCCPDHQ8NBX0 429 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 LHX4Q969G2 390 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 ZDHHC16Q969W1 377 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 TMIGD2Q96BF3 282 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 TEAD3Q99594 435 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 MICU1Q9BPX6 476 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 YTHDF1Q9BYJ9 559 aaKnown RBP13.36□□□□□ -0.27
LMNA-222ENST00000508500 CHIAQ9BZP6 476 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 CNTD2Q9H8S5 307 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 SNTG1Q9NSN8 517 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
LMNA-222ENST00000508500 IGHV1-69DA0A0B4J2H0 117 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 LOC100130705A0A1B0GUX0 176 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 AKR7A2O43488 359 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 PRKYO43930 277 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 ECDO95905 644 aaPredicted RBP13.35□□□□□ -0.27
LMNA-222ENST00000508500 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 EPHA2P29317 976 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 DLX1P56177 255 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 GMFBP60983 142 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 IL13RA1P78552 427 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 EFNB1P98172 346 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 IL5RAQ01344 420 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 PRB3Q04118 309 aaPredicted RBP13.35□□□□□ -0.27
LMNA-222ENST00000508500 PDCD1Q15116 288 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 PTGES3Q15185 160 aaKnown RBP13.35□□□□□ -0.27
LMNA-222ENST00000508500 SNAPC1Q16533 368 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 C11orf91Q3C1V1 193 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 METTL11BQ5VVY1 283 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 FIP1L1Q6UN15 594 aaKnown RBP13.35□□□□□ -0.27
LMNA-222ENST00000508500 KRT77Q7Z794 578 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 OR10Z1Q8NGY1 313 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 CYGBQ8WWM9 190 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 RNF170Q96K19 258 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 RTL8AQ9BWD3 113 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 TTTY10Q9BZA0 68 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 YIPF3Q9GZM5 350 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 NIPAL2Q9H841 368 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 NOX4Q9NPH5 578 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 ACOXLQ9NUZ1 547 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 HAO2Q9NYQ3 351 aa13.35□□□□□ -0.27
LMNA-222ENST00000508500 LAMP5Q9UJQ1 280 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms