RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 DNTTIP1Q9H147 329 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 SEMA6AQ9H2E6 1030 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF556Q9HAH1 456 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 SIRT7Q9NRC8 400 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 FAM206AQ9NX38 181 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 DNAJB11Q9UBS4 358 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 LAMP5Q9UJQ1 280 aa10.69□□□□□ -0.7
HMGCS1-205ENST00000508319 A0A0U1RQV5 110 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 TCRBV3S1A0A5B6 114 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 CCDC182A6NF36 153 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 NKX6-3A6NJ46 265 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 AKR7A2O43488 359 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 FKBP6O75344 327 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 RHBDL1O75783 438 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 ANXA8P13928 327 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 GPM6AP51674 278 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 DLX1P56177 255 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 C17orf107Q6ZR85 190 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 KCTD8Q6ZWB6 473 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 TRPM8Q7Z2W7 1104 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 SPATA24Q86W54 205 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 CMTM4Q8IZR5 234 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 Q8N7P7 452 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 PAPD5Q8NDF8 572 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 PIGCQ92535 297 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 RNF170Q96K19 258 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 CITED1Q99966 193 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 YIPF3Q9GZM5 350 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 DNAJB9Q9UBS3 223 aa10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 PRKDCP78527 4128 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF816-ZNF321PA0A0X1KG74 233 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 RNASEK-C17orf49H0YIS7 233 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 PSMD9O00233 223 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 SIGLEC5O15389 551 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 IGLV3-1P01715 115 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 MRPL3P09001 348 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 KLRD1Q13241 179 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 TAF9Q16594 264 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 DGUOKQ16854 277 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 KCTD18Q6PI47 426 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 DEGS2Q6QHC5 323 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 KRT77Q7Z794 578 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 FAM81AQ8TBF8 368 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 TTTY10Q9BZA0 68 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 OR51I2Q9H344 312 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 YY1AP1Q9H869 796 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 NLKQ9UBE8 527 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 SLC25A10Q9UBX3 287 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF222Q9UK12 451 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 COPS3Q9UNS2 423 aa10.67□□□□□ -0.7
HMGCS1-205ENST00000508319 IGKV1D-17A0A075B6S4 117 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 TMEM269A0A1B0GVZ9 245 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 ACOD1A6NK06 481 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 OR2AT4A6NND4 320 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 ZNF732B4DXR9 585 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 GYG2O15488 501 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 ACAA1P09110 424 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 GLRA1P23415 457 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 MAP2K3P46734 347 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 CAV3P56539 151 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 KRTAP10-3P60369 221 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 GNG3P63215 75 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 GUCA2AQ02747 115 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 ROM1Q03395 351 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 MFGE8Q08431 387 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 SNAPC1Q16533 368 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 CEACAM21Q3KPI0 293 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 DNAL1Q4LDG9 190 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 DMRTC1Q5HYR2 192 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 CEP78Q5JTW2 689 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 FAHD1Q6P587 224 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 BRICD5Q6PL45 260 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 LINC01006Q8NI28 216 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 NPRL2Q8WTW4 380 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 DNAJC9Q8WXX5 260 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 SLC7A6OSQ96CW6 309 aaPredicted RBP10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 OR8B4Q96RC9 309 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 TEAD3Q99594 435 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 TEX12Q9BXU0 123 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 DPAGT1Q9H3H5 408 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 GPR84Q9NQS5 396 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 PAPOLBQ9NRJ5 636 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 TVP23BQ9NYZ1 205 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 NUFIP1Q9UHK0 495 aaKnown RBP10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 POMPQ9Y244 141 aa10.66□□□□□ -0.7
HMGCS1-205ENST00000508319 OR5B21A6NL26 309 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 M0R1W7 72 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 NPFFO15130 113 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 PRKYO43930 277 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 FBP1P09467 338 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 PSG2P11465 335 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 ATP6V1B1P15313 513 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 FAHP16930 419 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 SAA4P35542 130 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 DAPP51397 102 aa10.65□□□□□ -0.7
HMGCS1-205ENST00000508319 CRISP1P54107 249 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms