RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 WNK1Q9H4A3 2382 aa9.46□□□□□ -0.89
HMGCS1-204ENST00000507293 TET2Q6N021 2002 aaPredicted RBP9.46□□□□□ -0.89
HMGCS1-204ENST00000507293 AKR7A2O43488 359 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 GK3PQ14409 553 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 ZDHHC23Q8IYP9 409 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 ADGRG5Q8IZF4 528 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 BBS1Q8NFJ9 593 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 ANGPTL6Q8NI99 470 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM81AQ8TBF8 368 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 NPRL2Q8WTW4 380 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 TNFRSF14Q92956 283 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 UBE2FQ969M7 185 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 ASB9Q96DX5 294 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 MED30Q96HR3 178 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 CLPTM1LQ96KA5 538 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 CHID1Q9BWS9 393 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 DNTTIP1Q9H147 329 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 ELL3Q9HB65 397 aaPredicted RBP9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 NLKQ9UBE8 527 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 LRP12Q9Y561 859 aa9.46□□□□□ -0.9
HMGCS1-204ENST00000507293 A0A1W2PQ09 198 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 SIGLEC5O15389 551 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 PRODHO43272 600 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 RHBDL1O75783 438 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 TSPAN15O95858 294 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 PAHP00439 452 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 NDUFB7P17568 137 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 CALB2P22676 271 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 GLRA1P23415 457 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 DCTDP32321 178 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 SAA4P35542 130 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 GABRA2P47869 451 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 GPM6AP51674 278 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 RPS7P62081 194 aaKnown RBP9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM76BQ5HYJ3 339 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 KRT77Q7Z794 578 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 CPOQ8IVL8 374 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 HS3ST5Q8IZT8 346 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 HIST1H2AAQ96QV6 131 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 C16orf95Q9H693 158 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 NIPAL2Q9H841 368 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 TCF7L1Q9HCS4 588 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 TRRAPQ9Y4A5 3859 aa9.45□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF816-ZNF321PA0A0X1KG74 233 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 MEIOCA2RUB1 952 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 SLC22A31A6NKX4 558 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 OR2AT4A6NND4 320 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF732B4DXR9 585 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 M0R1W7 72 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 PSMD9O00233 223 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 GNGT2O14610 69 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 E2F6O75461 281 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 HMGN1P05114 100 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 ACAA1P09110 424 aaPredicted RBP9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 OSMP13725 252 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 ALOX5APP20292 161 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 SLC2A5P22732 501 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 MAP2K3P46734 347 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 HCCSP53701 268 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 CAV3P56539 151 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 GNG3P63215 75 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 CDK5Q00535 292 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 BLMHQ13867 455 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 DMRTC1Q5HYR2 192 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 CEP78Q5JTW2 689 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 SLC35D3Q5M8T2 416 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 NCR3LG1Q68D85 454 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 COMMD2Q86X83 199 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 PAPD5Q8NDF8 572 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 OR5R1Q8NH85 324 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 CANT1Q8WVQ1 401 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 DUS3LQ96G46 650 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 PPA2Q9H2U2 334 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 OR51I2Q9H344 312 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 METTL8Q9H825 291 aaKnown RBP9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF556Q9HAH1 456 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM206AQ9NX38 181 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM53CQ9NYF3 392 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 LAMP5Q9UJQ1 280 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNF222Q9UK12 451 aa9.44□□□□□ -0.9
HMGCS1-204ENST00000507293 IGKV1D-17A0A075B6S4 117 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 ANKRD61A6NGH8 418 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 TSPAN9O75954 239 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 MRPL3P09001 348 aaKnown RBP9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 T-ENOLP0DO92 83 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 PSG2P11465 335 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 PRKACGP22612 351 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 TGFBR2P37173 567 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 UBE2E1P51965 193 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 EGR3Q06889 387 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 ACSM1Q08AH1 577 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 APOFQ13790 326 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 CEACAM21Q3KPI0 293 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 TMEM236Q5W0B7 351 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 HCP5Q6MZN7 132 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 C1orf122Q6ZSJ8 110 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 TRPM8Q7Z2W7 1104 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 THAP5Q7Z6K1 395 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 FAM185AQ8N0U4 392 aa9.43□□□□□ -0.9
HMGCS1-204ENST00000507293 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms