RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LSM2Q9Y333 95 aaKnown RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 WNK2Q9Y3S1 2297 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 TLN2Q9Y4G6 2542 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 A0A087WXM4 84 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 TRAV38-1A0A0B4J264 116 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 TRBV5-5A0A0J9YX44 114 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF879B4DU55 563 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 MAGEB3O15480 346 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 MLNRO43193 412 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 SPRY3O43610 288 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 ARL6IP5O75915 188 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 APOL3O95236 402 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 CYB5AP00167 134 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 HLA-DPB1P04440 258 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 CA6P23280 308 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 ACKR3P25106 362 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 GABRA5P31644 462 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 KIR3DL2P43630 455 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 GPR6P46095 362 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-205ENST00000506880 GZMKP49863 264 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 RBP2P50120 134 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 ATP1B3P54709 279 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 PPP3R1P63098 170 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 CCL8P80075 99 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 IL24Q13007 206 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 PRDX4Q13162 271 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 TNK1Q13470 666 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 TIMM50Q3ZCQ8 353 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 OTPQ5XKR4 325 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 FIP1L1Q6UN15 594 aaKnown RBP7.16□□□□□ -1.26
PDGFC-205ENST00000506880 GDPGP1Q6ZNW5 385 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 MKXQ8IYA7 352 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 OR13C3Q8NGS6 347 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 FOXRED1Q96CU9 486 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-205ENST00000506880 PGLYRP3Q96LB9 341 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 POFUT1Q9H488 388 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 ZCCHC4Q9H5U6 513 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 MSL2Q9HCI7 577 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 BRD7Q9NPI1 651 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 TMEM106BQ9NUM4 274 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 KAAG1Q9UBP8 84 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 GHRLQ9UBU3 117 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 GTF2A1LQ9UNN4 478 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 POLR3KQ9Y2Y1 108 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-205ENST00000506880 RHBDD3Q9Y3P4 386 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 NAV3Q8IVL0 2385 aa7.16□□□□□ -1.26
PDGFC-205ENST00000506880 MALRD1Q5VYJ5 2156 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 ACANP16112 2415 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 HIVEP2P31629 2446 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 PQLC2LA1A4F0 135 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 TRIM64CA6NLI5 447 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 SRRM5B3KS81 715 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 TMEM178BH3BS89 294 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 J3QT63 122 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 PSMD9O00233 223 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 SULT1B1O43704 296 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 SSX4O60224 188 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF780AO75290 641 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 SC5DO75845 299 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 LHBP01229 141 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 OCM2P0CE71 109 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 RAB3AP20336 220 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 USF1P22415 310 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 NANOS3P60323 173 aaKnown RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF154Q13106 437 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 MAB21L1Q13394 359 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 DOC2BQ14184 412 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 GPR176Q14439 515 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 FAM189A2Q15884 450 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 ATPAF1Q5TC12 328 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 TEX36Q5VZQ5 186 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 NLRC3Q7RTR2 1065 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 BIVMQ86UB2 503 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 LRRC28Q86X40 367 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 KRTAP1-3Q8IUG1 177 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 PNLDC1Q8NA58 520 aaKnown RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 PXT1Q8NFP0 134 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 OR1M1Q8NGA1 313 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 ITLN1Q8WWA0 313 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 GATAD2BQ8WXI9 593 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 GHSRQ92847 366 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 MRPS24Q96EL2 167 aaKnown RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 BORCS8Q96FH0 119 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 RNF170Q96K19 258 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 FAM71F1Q96KD3 344 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 COX4I2Q96KJ9 171 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 MGLLQ99685 303 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 UQCC2Q9BRT2 126 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 OR51I2Q9H344 312 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 ISG20L2Q9H9L3 353 aaKnown RBP7.15□□□□□ -1.26
PDGFC-205ENST00000506880 TMEM138Q9NPI0 162 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 TMEM160Q9NX00 188 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 UBAP1Q9NZ09 502 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 MIOXQ9UGB7 285 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 FZR1Q9UM11 496 aa7.15□□□□□ -1.26
PDGFC-205ENST00000506880 HIVEP1P15822 2718 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 TRBV5-7A0A0A0MS05 114 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 ZNF850A8MQ14 1090 aa7.14□□□□□ -1.27
PDGFC-205ENST00000506880 LGALS8O00214 317 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms