RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 GOLGA8JA6NMD2 632 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 H3BN98 237 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 CLDN34H7C241 214 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 MYL12BO14950 172 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 IGKV1D-16P01601 117 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 GOLGA8HP0CJ92 632 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 GFAPP14136 432 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 MEF2BQ02080 365 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 RPL18AQ02543 176 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 KLHL40Q2TBA0 621 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 MORN3Q6PF18 240 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 NDUFAF7Q7L592 441 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 DAZ4Q86SG3 579 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 KRTAP13-1Q8IUC0 172 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 BBS7Q8IWZ6 715 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 WDR31Q8NA23 367 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 SLC26A10Q8NG04 563 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 OR52N1Q8NH53 320 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 OR1S1Q8NH92 325 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 AGR3Q8TD06 166 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 GPX8Q8TED1 209 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 GABRG3Q99928 467 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 PDCD1LG2Q9BQ51 273 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 MS4A8Q9BY19 250 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 DAZ1Q9NQZ3 744 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 RAB22AQ9UL26 194 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 CARHSP1Q9Y2V2 147 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 OR51B2Q9Y5P1 312 aa1.89□□□□□ -2.11
TOPBP1-204ENST00000505804 ARPC4-TTLL3A0A0A6YYG9 625 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 UPK1BO75841 260 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 TUBG1P23258 451 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 CLDN6P56747 220 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 RAB11AP62491 216 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 PAFAH1B2P68402 229 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 RAB11BQ15907 218 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF678Q5SXM1 525 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 TPRG1LQ5T0D9 272 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 HHATQ5VTY9 493 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 LINC00336Q6ZUF6 198 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 DAW1Q8N136 415 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF664Q8N3J9 261 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 SFXN5Q8TD22 340 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 PEX13Q92968 403 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 NAT6Q93015 286 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 Q96MT0 163 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 ARV1Q9H2C2 271 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 FANCEQ9HB96 536 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 TUBG2Q9NRH3 451 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 PPIL1Q9Y3C6 166 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 RHBDD3Q9Y3P4 386 aa1.88□□□□□ -2.11
TOPBP1-204ENST00000505804 IGHV6-1A0A0B4J1U7 121 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 A0A1B0GTQ1 180 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 NCF1BA6NI72 391 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 NCF1CA8MVU1 366 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 KLHL2O95198 593 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 LCA5LO95447 670 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 IGLV6-57P01721 117 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 STAG3L3P0CL85 134 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 HLA-DMAP28067 261 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 GABRR2P28476 465 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 MPIP34949 423 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 ARL2P36404 184 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 TGM4P49221 684 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 MTPNP58546 118 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 TAS2R39P59534 338 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 PIP5KL1Q5T9C9 394 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 FAM131AQ6UXB0 335 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 OTUD6AQ7L8S5 288 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 MRPL21Q7Z2W9 205 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 TMCO2Q7Z6W1 182 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 PDPNQ86YL7 162 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 ZCCHC24Q8N2G6 241 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 PIH1D2Q8WWB5 315 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 MRPL48Q96GC5 212 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 ZMAT5Q9UDW3 170 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 HMGXB4Q9UGU5 601 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF230Q9UIE0 474 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 VAX2Q9UIW0 290 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 TTC41PQ6P2S7 1318 aa1.87□□□□□ -2.11
TOPBP1-204ENST00000505804 NLRC5Q86WI3 1866 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 SETD1AO15047 1707 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 TRAV8-6A0A0B4J262 113 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 A0A0G2JMP0 313 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 A0A0X1KG70 313 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 TMEM72A0PK05 275 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 TRDMT1O14717 391 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 TTC4O95801 387 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 SLC35G6P0C7Q6 338 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF35P13682 527 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 PMCHP20382 165 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 PRSS3P35030 304 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 CLDN8P56748 225 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 SLC35A1P78382 337 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 LCN2P80188 198 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 HIKESHIQ53FT3 197 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 MLIPQ5VWP3 458 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 LRP11Q86VZ4 500 aa1.86□□□□□ -2.11
TOPBP1-204ENST00000505804 SLC7A5P1Q8MH63 180 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms