RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 OR4E1P0C645 316 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 MPGP29372 298 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 NBL1P41271 181 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 TCF15Q12870 199 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 ATP1A1-AS1Q5TC04 95 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 TMEM17Q86X19 198 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 FTMTQ8N4E7 242 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR4K15Q8NH41 348 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 APOBEC3DQ96AK3 386 aaPredicted RBP15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 MS4A3Q96HJ5 214 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 GMPPAQ96IJ6 420 aaPredicted RBP15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 SLC6A7Q99884 636 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 GPR173Q9NS66 373 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 HSF4Q9ULV5 492 aa15.02□□□□□ -0.01
TRAPPC11-204ENST00000505676 ZNF318Q5VUA4 2279 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 SMLR1H3BR10 107 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 J3QW42 95 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 CSTBP04080 98 aaKnown RBP15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 TMEM50BP56557 158 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 ARFRP1Q13795 201 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 CCDC36Q8IYA8 594 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 ZSCAN4Q8NAM6 433 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR2AE1Q8NHA4 323 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 FGFBP3Q8TAT2 258 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 ST8SIA4Q92187 359 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 EIF3KQ9UBQ5 218 aaKnown RBP15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 BOLA1Q9Y3E2 137 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 TMEM225BP0DP42 221 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 ATPAF1Q5TC12 328 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 SLC25A42Q86VD7 318 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 HOGA1Q86XE5 327 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 CSNK2A3Q8NEV1 391 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR13C8Q8NGS7 320 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 Q96M66 194 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 B3GNT2Q9NY97 397 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 EDARQ9UNE0 448 aa15.01□□□□□ -0.01
TRAPPC11-204ENST00000505676 CEACAM18A8MTB9 384 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 PRSS44E7EML9 344 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 TPOP07202 933 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 SERPINA2P20848 420 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 BLVRBP30043 206 aaPredicted RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 AGTR1P30556 359 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 HRH1P35367 487 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 ECI1P42126 302 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 RSU1Q15404 277 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 SCGB2B2Q4G0G5 96 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 FBXW9Q5XUX1 488 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 NSUN5P2Q63ZY6 315 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 MUC20Q8N307 709 aaPredicted RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 C12orf45Q8N5I9 185 aaPredicted RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 ARHGAP5-AS1Q96IT6 56 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 PECRQ9BY49 303 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 DEFB127Q9H1M4 99 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 ELF5Q9UKW6 265 aaPredicted RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 LIPGQ9Y5X9 500 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 NKX2-8O15522 239 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 TPD52L2O43399 206 aaKnown RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 SS18L1O75177 396 aaPredicted RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 PATE4P0C8F1 98 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR3A2P47893 321 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 ZNF92Q03936 586 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 RTP5Q14D33 572 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 Q5BKY6 102 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 RNF144BQ7Z419 303 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 VASH2Q86V25 355 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 CPEB3Q8NE35 698 aaKnown RBP15□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR4S1Q8NGB4 309 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 NPRL2Q8WTW4 380 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 PIPOXQ9P0Z9 390 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 SPRR3Q9UBC9 169 aa15□□□□□ -0.01
TRAPPC11-204ENST00000505676 F5H5P2 479 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 CEACAM4O75871 244 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 CNOT4O95628 575 aaKnown RBP14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 IGHV3-9P01782 118 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 EDN3P14138 238 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 PMELP40967 661 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 GMFBP60983 142 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 CAMK2BQ13554 666 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR5H2Q8NGV7 314 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 REPIN1Q9BWE0 567 aaKnown RBP14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 CHST6Q9GZX3 395 aa14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 ELL3Q9HB65 397 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC11-204ENST00000505676 AQP7O14520 342 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 IL2RAP01589 272 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 CCL11P51671 97 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 C1QL2Q7Z5L3 287 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 SAXO1Q8IYX7 474 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 GVQW1Q8N7I0 195 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 FDCSPQ8NFU4 85 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR5D18Q8NGL1 313 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 OR1K1Q8NGR3 316 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 WDR87Q6ZQQ6 2873 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 HMSDA8MTL9 139 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 CST4P01036 141 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 HLA-GP17693 338 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 SURF2Q15527 256 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 LIN54Q6MZP7 749 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 NUFIP2Q7Z417 695 aaKnown RBP14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 P4HA3Q7Z4N8 544 aa14.98□□□□□ -0.01
TRAPPC11-204ENST00000505676 LYG2Q86SG7 212 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms