RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ISOC1Q96CN7 298 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 HDHD2Q9H0R4 259 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 CDIP1Q9H305 208 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 TMEM38AQ9H6F2 299 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 RMND5AQ9H871 391 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 SLC25A10Q9UBX3 287 aaPredicted RBP5.53□□□□□ -1.52
VCAN-206ENST00000505615 SCOCQ9UIL1 159 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 PITPNC1Q9UKF7 332 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 AURKCQ9UQB9 309 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 RAP2CQ9Y3L5 183 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 LHFPL6Q9Y693 200 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 SMAD5-AS1Q9Y6J3 95 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 KIAA2026Q5HYC2 2103 aa5.53□□□□□ -1.52
VCAN-206ENST00000505615 TRBV5-3A0A0A0MS03 114 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 FAM90A22PA8MWA6 464 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 NUDT19A8MXV4 375 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 ODF3BA8MYP8 253 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 H0YAE9 185 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 IMPA2O14732 288 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 SIGLEC5O15389 551 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 TYROBPO43914 113 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 SERPINB7O75635 380 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 RHBDL1O75783 438 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 ACTL6BO94805 426 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 COX7A1P24310 79 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 SDHAP31040 664 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 RBM34P42696 430 aaKnown RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 CEBPDP49716 269 aaPredicted RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 RPL14P50914 215 aaKnown RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 DYNLT3P51808 116 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 MXRA7P84157 204 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 TRIM25Q14258 630 aaKnown RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 MESTQ5EB52 335 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 LRIF1Q5T3J3 769 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 RAB12Q6IQ22 244 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 KCTD18Q6PI47 426 aaPredicted RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 SLC2A7Q6PXP3 512 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 CORO6Q6QEF8 472 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 PGAP1Q75T13 922 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 MRPL21Q7Z2W9 205 aaKnown RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 NAA40Q86UY6 237 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 EGFL6Q8IUX8 553 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 OR5K1Q8NHB7 308 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 STON2Q8WXE9 905 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 DDB2Q92466 427 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 FOXRED1Q96CU9 486 aaPredicted RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 DUX3Q96PT4 197 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 TM2D3Q9BRN9 247 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 DNTTIP1Q9H147 329 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 WDR13Q9H1Z4 485 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 C19orf12Q9NSK7 152 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 MRPL15Q9P015 296 aaKnown RBP5.52□□□□□ -1.53
VCAN-206ENST00000505615 ZNF391Q9UJN7 358 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 FBXL7Q9UJT9 491 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 GMEB1Q9Y692 573 aa5.52□□□□□ -1.53
VCAN-206ENST00000505615 TRAV27A0A087WT01 109 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 PRSS37A4D1T9 235 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 APOL3O95236 402 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 SNRNP70P08621 437 aaKnown RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 FRMD6-AS1P0C7T7 363 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 NDUFB7P17568 137 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 POLR2JP52435 117 aaKnown RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 CRYBA2P53672 197 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 ZNF92Q03936 586 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 BAK1Q16611 211 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 MEP1BQ16820 701 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 C9orf66Q5T8R8 295 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 CFAP77Q6ZQR2 320 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 FAM122BQ7Z309 247 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 MAVSQ7Z434 540 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 FAM185AQ8N0U4 392 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 OR1M1Q8NGA1 313 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 OR56B2PQ8NGI1 322 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 OR2AE1Q8NHA4 323 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 ANGPTL6Q8NI99 470 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 TMEM239Q8WW34 195 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 Q96M85 177 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 RAB3IPQ96QF0 476 aaPredicted RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 TLNRD1Q9H1K6 362 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 WDR55Q9H6Y2 383 aaPredicted RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 HEXA-AS1Q9H8Q6 139 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 PNRC2Q9NPJ4 139 aaKnown RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 SDR39U1Q9NRG7 319 aaPredicted RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 ABCB10Q9NRK6 738 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 SNTG1Q9NSN8 517 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 HAO2Q9NYQ3 351 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 VAPAQ9P0L0 249 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 RABL2AQ9UBK7 228 aaPredicted RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 ZNF256Q9Y2P7 627 aaPredicted RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 COA3Q9Y2R0 106 aaPredicted RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 ADAM18Q9Y3Q7 739 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 TBL2Q9Y4P3 447 aaKnown RBP5.51□□□□□ -1.53
VCAN-206ENST00000505615 PKHD1P08F94 4074 aa5.51□□□□□ -1.53
VCAN-206ENST00000505615 SH2D7A6NKC9 451 aaPredicted RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 PTGES3LE9PB15 166 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 M0QX08 132 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 GLCEO94923 617 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
VCAN-206ENST00000505615 LCATP04180 440 aa5.5□□□□□ -1.53
VCAN-206ENST00000505615 AMY1AP04745 511 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms