RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 CATSPER2Q96P56 530 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 ZBTB18Q99592 522 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 NAPGQ99747 312 aaPredicted RBP2.09□□□□□ -2.07
RFC1-209ENST00000504974 SLC39A3Q9BRY0 314 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 DDA1Q9BW61 102 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 SLC25A39Q9BZJ4 359 aaPredicted RBP2.09□□□□□ -2.07
RFC1-209ENST00000504974 ROPN1BQ9BZX4 212 aaPredicted RBP2.09□□□□□ -2.07
RFC1-209ENST00000504974 IL22Q9GZX6 179 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 KIR3DX1Q9H7L2 352 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 UGT1A7Q9HAW7 530 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 UGT1A10Q9HAW8 530 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 UGT1A8Q9HAW9 530 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 RDH14Q9HBH5 336 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 MRM3Q9HC36 420 aaKnown RBP2.09□□□□□ -2.07
RFC1-209ENST00000504974 SLC40A1Q9NP59 571 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 TREX1Q9NSU2 369 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 IMP3Q9NV31 184 aaKnown RBP2.09□□□□□ -2.07
RFC1-209ENST00000504974 SLC25A37Q9NYZ2 338 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 SLC23A2Q9UGH3 650 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 GNPTGQ9UJJ9 305 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 SNX12Q9UMY4 172 aa2.09□□□□□ -2.07
RFC1-209ENST00000504974 AKAP9Q99996 3911 aa2.09□□□□□ -2.08
RFC1-209ENST00000504974 DNHD1Q96M86 4753 aa2.09□□□□□ -2.08
RFC1-209ENST00000504974 SNRNP200O75643 2136 aaKnown RBP2.09□□□□□ -2.08
RFC1-209ENST00000504974 HIVEP2P31629 2446 aa2.09□□□□□ -2.08
RFC1-209ENST00000504974 CACNA1CQ13936 2221 aa2.09□□□□□ -2.08
RFC1-209ENST00000504974 MGAM2Q2M2H8 2515 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CIB4A0PJX0 185 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CCDC182A6NF36 153 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 TLCD2A6NGC4 264 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 FOXE1O00358 373 aaPredicted RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 PRMT5O14744 637 aaPredicted RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 PFDN6O15212 129 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OR1I1O60431 355 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 FCMRO60667 390 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 B4GALT2O60909 372 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 KRT14P02533 472 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 RPN2P04844 631 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 MLNP12872 115 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CCL4P13236 92 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CD99P14209 185 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CRISP2P16562 243 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 TBPP20226 339 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OGNP20774 298 aaKnown RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 RPS3P23396 243 aaKnown RBP eCLIP2.08□□□□□ -2.08
RFC1-209ENST00000504974 COILP38432 576 aaPredicted RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 MAGEA3P43357 314 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CD151P48509 253 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 TTPAP49638 278 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 LHX2P50458 406 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 GFERP55789 205 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ERVK-25P63136 954 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CRADDP78560 199 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 PPP1R7Q15435 360 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 TRIP13Q15645 432 aaPredicted RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 DEFB109BQ30KR1 87 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 KRTAP13-3Q3SY46 172 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ZBED5Q49AG3 693 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 PHYHD1Q5SRE7 291 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ANKRD22Q5VYY1 191 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 PTRHD1Q6GMV3 140 aaKnown RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 SPNS3Q6ZMD2 512 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ZNF621Q6ZSS3 439 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 FAM92BQ6ZTR7 304 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 LRRC6Q86X45 466 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 PIANPQ8IYJ0 282 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OTUD6BQ8N6M0 293 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 TPRX1Q8N7U7 411 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 Q8N9L7 120 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 MDS2Q8NDY4 140 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OR4F15Q8NGB8 312 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OR1L6Q8NGR2 347 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OR5K2Q8NHB8 316 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 LKAAEAR1Q8TD35 194 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 NAT14Q8WUY8 206 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 LCN9Q8WX39 176 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ELMO1Q92556 727 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 TFGQ92734 400 aaPredicted RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 MAGOHBQ96A72 148 aaKnown RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 KIAA1143Q96AT1 154 aaPredicted RBP2.08□□□□□ -2.08
RFC1-209ENST00000504974 PLEKHA8Q96JA3 519 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 SERPINB12Q96P63 405 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 MS4A4EQ96PG1 132 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CHRDL1Q9BU40 450 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 KIFC1Q9BW19 673 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ULBP3Q9BZM4 244 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 OR52A5Q9H2C5 316 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 FAM96AQ9H5X1 160 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 FANCEQ9HB96 536 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 SLCO1B3Q9NPD5 702 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 ADAP2Q9NPF8 381 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 FBXO8Q9NRD0 319 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CHRAC1Q9NRG0 131 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 GLRX2Q9NS18 164 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 SLC39A1Q9NY26 324 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CALYQ9NYX4 217 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 CLCF1Q9UBD9 225 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 PCYOX1Q9UHG3 505 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 KLK12Q9UKR0 248 aa2.08□□□□□ -2.08
RFC1-209ENST00000504974 PYCARDQ9ULZ3 195 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms