RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ADAT3Q96EY9 351 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-207ENST00000504761 FAAP24Q9BTP7 215 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 SPACA1Q9HBV2 294 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 MRPL22Q9NWU5 206 aaKnown RBP12.43□□□□□ -0.42
TCOF1-207ENST00000504761 C1orf123Q9NWV4 160 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF407Q9C0G0 2248 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF354AO60765 605 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-207ENST00000504761 HOXA6P31267 233 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 GABRA4P48169 554 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 CDC20Q12834 499 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 OR10J5Q8NHC4 309 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 FGF11Q92914 225 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 GPX7Q96SL4 187 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-207ENST00000504761 V9GYH0 126 aa12.43□□□□□ -0.42
TCOF1-207ENST00000504761 RAB27BO00194 218 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 UMODP07911 640 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 PRDX4Q13162 271 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 RGS7BPQ6MZT1 257 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF808Q8N4W9 903 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 SPSB1Q96BD6 273 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 KLF4O43474 513 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 AGFG2O95081 481 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 IFNA17P01571 189 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 MMP16P51512 607 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 GK2Q14410 553 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 GPR157Q5UAW9 335 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 MRPL14Q6P1L8 145 aaKnown RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 C17orf82Q86X59 251 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF610Q8N9Z0 462 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 OR4D6Q8NGJ1 314 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 FBXO17Q96EF6 278 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 TMEM38BQ9NVV0 291 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 KIR2DS1A0A191URI9 304 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 ACTL6AO96019 429 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 KIR2DS4P43632 304 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 KIR2DS1Q14954 304 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 HGDQ93099 445 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 ZC3H10Q96K80 434 aaKnown RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 TMEM100Q9NV29 134 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 FLVCR1Q9Y5Y0 555 aa12.42□□□□□ -0.42
TCOF1-207ENST00000504761 CHCHD2Q9Y6H1 151 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-207ENST00000504761 PLGLAQ15195 96 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 RGCCQ9H4X1 137 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 FREM3P0C091 2139 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 IGLV1-36A0A0B4J1U3 117 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 K7EPK0 472 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 SNAPC5O75971 98 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 TXNDC12O95881 172 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 CYC1P08574 325 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 OR4E1P0C645 316 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 EFNB2P52799 333 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 LINC01590Q5TEZ4 76 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 NAA40Q86UY6 237 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 SIGLEC12Q96PQ1 595 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 NPAP1Q9NZP6 1156 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 ZMIZ1Q9ULJ6 1067 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 PRR19A6NJB7 356 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 SH2D1BO14796 132 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 ATG12O94817 140 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 GSTP1P09211 210 aaKnown RBP12.41□□□□□ -0.42
TCOF1-207ENST00000504761 DDOSTP39656 456 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 ZP4Q12836 540 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 ZNF79Q15937 498 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 CSRP2Q16527 193 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 YIPF5Q969M3 257 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 NEURL2Q9BR09 285 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 ZFP57Q9NU63 452 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 GFOD1Q9NXC2 390 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 GMDSO60547 372 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 TTRP02766 147 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 CELA3AP09093 270 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 CD82P27701 267 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 GNG3P63215 75 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 MRPS34P82930 218 aaKnown RBP12.41□□□□□ -0.42
TCOF1-207ENST00000504761 RSPO4Q2I0M5 234 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-207ENST00000504761 COMMD7Q86VX2 200 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 SPAG16Q8N0X2 631 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 ADAT1Q9BUB4 502 aaKnown RBP12.41□□□□□ -0.42
TCOF1-207ENST00000504761 TMPRSS13Q9BYE2 586 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 RNF150Q9ULK6 438 aa12.41□□□□□ -0.42
TCOF1-207ENST00000504761 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 A0A1W2PRS3 328 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 AKR7A2O43488 359 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 SELEP16581 610 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 HLXQ14774 488 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-207ENST00000504761 STX12Q86Y82 276 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.42
TCOF1-207ENST00000504761 NFAM1Q8NET5 270 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms