RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TP53I3Q53FA7 332 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 RBMS3Q6XE24 437 aaKnown RBP11.84□□□□□ -0.51
HOXC9-202ENST00000504557 BRD3OSQ6XYD6 125 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 BATF2Q8N1L9 274 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 MNTQ99583 582 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 ABCB9Q9NP78 766 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 GPR173Q9NS66 373 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 HAO2Q9NYQ3 351 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 ENPP5Q9UJA9 477 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 GNG8Q9UK08 70 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 SNX5Q9Y5X3 404 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 A0A0A6YYJ9 748 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 KIR2DS1A0A191URI9 304 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.83□□□□□ -0.52
HOXC9-202ENST00000504557 TRIM77I1YAP6 450 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 NDUFA2O43678 99 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 ENTPD6O75354 484 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 SRSF10O75494 262 aaKnown RBP11.83□□□□□ -0.52
HOXC9-202ENST00000504557 MTRF1O75570 445 aaKnown RBP11.83□□□□□ -0.52
HOXC9-202ENST00000504557 DHRS3O75911 302 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 NRASP01111 189 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 SFTPBP07988 381 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 OR2T7P0C7T2 308 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 SELLP14151 372 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 CPT2P23786 658 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 DCTDP32321 178 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 GABRA2P47869 451 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 NPY4RP50391 375 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF684Q5T5D7 378 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 TEX36Q5VZQ5 186 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 CD276Q5ZPR3 534 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 BTN2A1Q7KYR7 527 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 OR2T27Q8NH04 317 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 H1FXQ92522 213 aaKnown RBP11.83□□□□□ -0.52
HOXC9-202ENST00000504557 RFKQ969G6 155 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 MOB1AQ9H8S9 216 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 GMPPBQ9Y5P6 360 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 STAB1Q9NY15 2570 aa11.83□□□□□ -0.52
HOXC9-202ENST00000504557 MDFIC2A0A1B0GVS7 189 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 NKX6-3A6NJ46 265 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 METTL15A6NJ78 407 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 HAX1O00165 279 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 TNFRSF13BO14836 293 aaPredicted RBP11.82□□□□□ -0.52
HOXC9-202ENST00000504557 FCN3O75636 299 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 MUC1P15941 1255 aaPredicted RBP11.82□□□□□ -0.52
HOXC9-202ENST00000504557 GLRA1P23415 457 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 GNG3P63215 75 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 CEACAM21Q3KPI0 293 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 RUSC1-AS1Q66K80 236 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 HAGHLQ6PII5 290 aaPredicted RBP11.82□□□□□ -0.52
HOXC9-202ENST00000504557 SLC36A1Q7Z2H8 476 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 FAM220AQ7Z4H9 259 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 C10orf67Q8IYJ2 551 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 ELMOD2Q8IZ81 293 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 TRMT10AQ8TBZ6 339 aaKnown RBP11.82□□□□□ -0.52
HOXC9-202ENST00000504557 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 RNFT2Q96EX2 444 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 HRASLS5Q96KN8 279 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF488Q96MN9 340 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 MBOAT4Q96T53 435 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 C9orf16Q9BUW7 83 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 TLNRD1Q9H1K6 362 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 PLEKHA1Q9HB21 404 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 TNFRSF19Q9NS68 423 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 USE1Q9NZ43 259 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
HOXC9-202ENST00000504557 A0A1B0GVI7 797 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 NDUFB3O43676 98 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 TOX4O94842 621 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 INMTO95050 263 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 MTNR1AP48039 350 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ARF6P62330 175 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF85Q03923 595 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 PRB3Q04118 309 aaPredicted RBP11.81□□□□□ -0.52
HOXC9-202ENST00000504557 BAMBIQ13145 260 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 CLVS2Q5SYC1 327 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 METTL11BQ5VVY1 283 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ZBTB49Q6ZSB9 765 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 USP43Q70EL4 1123 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 PQLC1Q8N2U9 271 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ZDHHC22Q8N966 263 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 PNLDC1Q8NA58 520 aaKnown RBP11.81□□□□□ -0.52
HOXC9-202ENST00000504557 RORBQ92753 470 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 GCDHQ92947 438 aaPredicted RBP11.81□□□□□ -0.52
HOXC9-202ENST00000504557 STMN2Q93045 179 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 DACT3Q96B18 629 aaPredicted RBP11.81□□□□□ -0.52
HOXC9-202ENST00000504557 TMIGD2Q96BF3 282 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 UPRTQ96BW1 309 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
HOXC9-202ENST00000504557 SLC29A1Q99808 456 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ADI1Q9BV57 179 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 OR51I2Q9H344 312 aa11.81□□□□□ -0.52
HOXC9-202ENST00000504557 ACOXLQ9NUZ1 547 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms