RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 ASPHD2Q6ICH7 369 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 KRT74Q7RTS7 529 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 LRRC75A-AS1Q8N1F1 130 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 FTMTQ8N4E7 242 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 OR13C9Q8NGT0 318 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 CCL17Q92583 94 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 RDH5Q92781 318 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 RPL3LQ92901 407 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 NKX3-1Q99801 234 aaPredicted RBP11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 FOXC2Q99958 501 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 RTL8AQ9BWD3 113 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 BARX1Q9HBU1 254 aaPredicted RBP11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 GCM1Q9NP62 436 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 SF3B6Q9Y3B4 125 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 DYSFO75923 2080 aa11.21□□□□□ -0.62
PDLIM7-212ENST00000504380 A6NLC8 198 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 DHRS7CA6NNS2 312 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 ZNF879B4DU55 563 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 PIN1P1O15428 100 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 RP2O75695 350 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 ZNF205O95201 554 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 CYB5R3P00387 301 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 ATF1P18846 271 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 CRYBB2P43320 205 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 TESK1Q15569 626 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 CLEC12BQ2HXU8 276 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 Q499Y3 187 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 ACSM3Q53FZ2 586 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 FAM201AQ5SY85 155 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 C11orf53Q8IXP5 236 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 BOLLQ8N9W6 283 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 SPERTQ8NA61 448 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 WFDC11Q8NEX6 87 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 OR1M1Q8NGA1 313 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 OR51A2Q8NGJ7 313 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 MUL1Q969V5 352 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 TMEM106AQ96A25 262 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 SPACA5Q96QH8 159 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 CHST5Q9GZS9 411 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 ZCCHC4Q9H5U6 513 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 C14orf119Q9NWQ9 140 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 PPP1R3CQ9UQK1 317 aa11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 NOP16Q9Y3C1 178 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-212ENST00000504380 FBN3Q75N90 2809 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 IGKV1-27A0A075B6S5 117 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 TRAV8-7A0A075B6U6 113 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 TRBV5-7A0A0A0MS05 114 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 PQLC2LA1A4F0 135 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 SERPINA3P01011 423 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 TNFRSF1AP19438 455 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 PDLIM4P50479 330 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 GMFBP60983 142 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 GNG3P63215 75 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 FABP5Q01469 135 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 ZNF154Q13106 437 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 GPR50Q13585 617 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 AVPI1Q5T686 147 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 UNQ9370/PRO34162Q6UXP9 181 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 TMEM91Q6ZNR0 172 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 CEACAM19Q7Z692 300 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 ANGPTL5Q86XS5 388 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 SERPINA12Q8IW75 414 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 BATF2Q8N1L9 274 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 PARP16Q8N5Y8 322 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 C19orf18Q8NEA5 215 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 OR5A2Q8NGI9 324 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 PP6455Q8WZ26 134 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 FCGR1BQ92637 280 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 ITFG2Q969R8 447 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 RFT1Q96AA3 541 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 C10orf35Q96D05 121 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 Q96MF0 132 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 DERL3Q96Q80 235 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 PPIL3Q9H2H8 161 aaKnown RBP11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 NOX4Q9NPH5 578 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 TMEM106BQ9NUM4 274 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 SLC7A11Q9UPY5 501 aa11.19□□□□□ -0.62
PDLIM7-212ENST00000504380 DNHD1Q96M86 4753 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 TANC2Q9HCD6 1990 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 hCG_1807616A0A1W2PRN6 198 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 TRIM64BA6NI03 449 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 TRIM64CA6NLI5 447 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 CDIPTO14735 213 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 GATBO75879 557 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 PLATP00750 562 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 AZGP1P25311 298 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 HFEQ30201 348 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 SYT6Q5T7P8 510 aaPredicted RBP11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 CLEC2AQ6UVW9 174 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 SPNS3Q6ZMD2 512 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 UTS2BQ765I0 119 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 CELF2-AS1Q8N7Q2 184 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 SCCPDHQ8NBX0 429 aa11.18□□□□□ -0.62
PDLIM7-212ENST00000504380 OR5D14Q8NGL3 314 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms