RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TMEM236Q5W0B7 351 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 UNQ9165/PRO28630Q6UXU0 137 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 OSR2Q8N2R0 312 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 TCAIMQ8N3R3 496 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 LINC00469Q8N7U9 141 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 ASCC1Q8N9N2 400 aaKnown RBP2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR4A15Q8NGL6 344 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR10Z1Q8NGY1 313 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 SUN5Q8TC36 379 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 C17orf50Q8WW18 174 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 CPNE4Q96A23 557 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 FAM131CQ96AQ9 280 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 RNF170Q96K19 258 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 GPR82Q96P67 336 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 ALS2CR12Q96Q35 445 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 NAPGQ99747 312 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 GABRG3Q99928 467 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 CHCHD7Q9BUK0 85 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 ING2Q9H160 280 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 ARV1Q9H2C2 271 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 GAL3ST2Q9H3Q3 398 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 KIR3DX1Q9H7L2 352 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 C6orf50Q9HD87 102 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 TREX1Q9NSU2 369 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 SIGLEC7Q9Y286 467 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 NOSIPQ9Y314 301 aaKnown RBP2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 MAP3K19Q56UN5 1328 aa2.84□□□□□ -1.96
TRAPPC13-205ENST00000504243 YEATS2Q9ULM3 1422 aa2.84□□□□□ -1.96
TRAPPC13-205ENST00000504243 A0A0J9YYE9 177 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 BTNL10A8MVZ5 291 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 CENPBD1B2RD01 187 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 YKT6O15498 198 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 CDRT1O95170 752 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 SMC2O95347 1197 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 SNAI1O95863 264 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 TRBC1P01850 177 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 TPM3P06753 285 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 SLC35G6P0C7Q6 338 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZNF14P17017 642 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 PSMB5P28074 263 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 TAS2R39P59534 338 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 PSMC5P62195 406 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 C2orf54Q08AI8 447 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 INCA1Q0VD86 236 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 ST3GAL4Q11206 333 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 SHHQ15465 462 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 KLHL12Q53G59 568 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 TMEM105Q8N8V8 129 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 GATSQ8NAP1 163 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 OR1L1Q8NH94 360 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 ATP6V1G3Q96LB4 118 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 C18orf15Q96N68 181 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZNF396Q96N95 335 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 HEBP1Q9NRV9 189 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 TAS2R5Q9NYW4 299 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 BZW2Q9Y6E2 419 aaKnown RBP2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 TSPOAP1O95153 1857 aa2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 KIF26AQ9ULI4 1882 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC13-205ENST00000504243 AHDC1Q5TGY3 1603 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 COL4A4P53420 1690 aaPredicted RBP2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 TRAV8-4A0A0B4J246 113 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 IGHV1-3A0A0C4DH29 117 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 ISPDA4D126 451 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 HSBP1L1C9JCN9 74 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 LINC01619G3V211 115 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 H7C2Y5 167 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 K7ERQ8 282 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 PSMD11O00231 422 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 PSPHP1O15172 72 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 CETN3O15182 167 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 PLEKHA8P1O95397 391 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 P01737 135 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 TAS2R43P59537 309 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 PPP1CAP62136 330 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 ZNF616Q08AN1 781 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 CPTPQ5TA50 214 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 STEAP4Q687X5 459 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 DUPD1Q68J44 220 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 SLC25A25Q6KCM7 469 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 DEGS2Q6QHC5 323 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 IGFL1Q6UW32 110 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 SLC7A5P1Q8MH63 180 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 CYB561A3Q8NBI2 242 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 NDNFQ8TB73 568 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 DEDD2Q8WXF8 326 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 TMEM234Q8WY98 164 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 SNF8Q96H20 258 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 CSNK1G1Q9HCP0 422 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 SIGLEC9Q9Y336 463 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 GMEB1Q9Y692 573 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 ENPP4Q9Y6X5 453 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 S4R3C0 116 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 SBNO1A3KN83 1393 aa2.82□□□□□ -1.96
TRAPPC13-205ENST00000504243 AK9Q5TCS8 1911 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 TRAV8-6A0A0B4J262 113 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 K7EM74 188 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 CCDC22O60826 627 aa2.81□□□□□ -1.96
TRAPPC13-205ENST00000504243 CXCR1P25024 350 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms